Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | STMM1_RS01540 | Genome accession | NZ_CP065484 |
| Coordinates | 278532..278741 (+) | Length | 69 a.a. |
| NCBI ID | WP_002946147.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain MM1 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 273532..283741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STMM1_RS01510 (STMM1_01505) | - | 273971..274480 (+) | 510 | WP_024704182.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| STMM1_RS01515 (STMM1_01510) | - | 274791..275348 (+) | 558 | WP_071417478.1 | ECF transporter S component | - |
| STMM1_RS01520 (STMM1_01515) | - | 275351..276001 (+) | 651 | WP_071417477.1 | phosphatase PAP2 family protein | - |
| STMM1_RS01525 (STMM1_01520) | comR | 276196..277095 (+) | 900 | WP_014607953.1 | helix-turn-helix domain-containing protein | Regulator |
| STMM1_RS01530 | - | 277333..277764 (+) | 432 | Protein_248 | cysteine peptidase family C39 domain-containing protein | - |
| STMM1_RS01535 | - | 277794..278459 (+) | 666 | Protein_249 | ABC transporter transmembrane domain-containing protein | - |
| STMM1_RS01540 | comA | 278532..278741 (+) | 210 | WP_002946147.1 | hypothetical protein | Regulator |
| STMM1_RS01545 (STMM1_01545) | - | 278796..279364 (+) | 569 | Protein_251 | ATP-binding cassette domain-containing protein | - |
| STMM1_RS01550 (STMM1_01550) | - | 279472..279789 (+) | 318 | WP_011225454.1 | DUF805 domain-containing protein | - |
| STMM1_RS01555 | - | 279752..280036 (-) | 285 | WP_014727318.1 | hypothetical protein | - |
| STMM1_RS01560 | - | 280276..281172 (-) | 897 | WP_224102957.1 | urease cluster protein | - |
| STMM1_RS01565 (STMM1_01560) | - | 281577..282092 (+) | 516 | WP_002949547.1 | AmiS/UreI family transporter | - |
| STMM1_RS01570 (STMM1_01565) | - | 282117..282419 (+) | 303 | WP_002886558.1 | urease subunit gamma | - |
| STMM1_RS01575 (STMM1_01570) | - | 282431..282742 (+) | 312 | WP_002886559.1 | urease subunit beta | - |
Sequence
Protein
Download Length: 69 a.a. Molecular weight: 8157.54 Da Isoelectric Point: 9.7339
>NTDB_id=510406 STMM1_RS01540 WP_002946147.1 278532..278741(+) (comA) [Streptococcus thermophilus strain MM1]
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
MITYSMLLNYFTTPLINIIYLQSKIQQAKVANNCLQEVYVVNKEEKGQLKDLSFKQLDLKGVSHRFRYQ
Nucleotide
Download Length: 210 bp
>NTDB_id=510406 STMM1_RS01540 WP_002946147.1 278532..278741(+) (comA) [Streptococcus thermophilus strain MM1]
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
TTGATTACCTATAGTATGTTGCTTAATTATTTTACGACTCCTTTAATTAATATTATCTATCTTCAATCTAAGATTCAGCA
AGCCAAGGTAGCCAATAATTGTCTTCAAGAAGTTTATGTTGTGAATAAGGAAGAAAAAGGTCAACTCAAAGATTTATCCT
TTAAACAATTAGACTTAAAAGGTGTTAGTCATCGTTTCAGATACCAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus gordonii str. Challis substr. CH1 |
54.167 |
100 |
0.565 |
| comA | Streptococcus mitis NCTC 12261 |
52.778 |
100 |
0.551 |
| comA | Streptococcus pneumoniae Rx1 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae D39 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae R6 |
51.389 |
100 |
0.536 |
| comA | Streptococcus pneumoniae TIGR4 |
51.389 |
100 |
0.536 |
| comA | Streptococcus mitis SK321 |
50 |
100 |
0.522 |
| comA/nlmT | Streptococcus mutans UA159 |
44.286 |
100 |
0.449 |