Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   STCNRZ760_RS07510 Genome accession   NZ_CP065482
Coordinates   1443386..1444081 (-) Length   231 a.a.
NCBI ID   WP_082309090.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ760     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1438386..1449081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ760_RS07495 (STCNRZ760_07435) - 1439197..1439742 (-) 546 WP_022096992.1 GNAT family N-acetyltransferase -
  STCNRZ760_RS07500 (STCNRZ760_07440) - 1439808..1441070 (-) 1263 WP_022096991.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  STCNRZ760_RS07505 (STCNRZ760_07445) - 1441156..1443396 (-) 2241 WP_180481070.1 DNA internalization-related competence protein ComEC/Rec2 -
  STCNRZ760_RS07510 (STCNRZ760_07450) comEA 1443386..1444081 (-) 696 WP_082309090.1 helix-hairpin-helix domain-containing protein Machinery gene
  STCNRZ760_RS07515 (STCNRZ760_07455) - 1444189..1444944 (-) 756 WP_002948862.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  STCNRZ760_RS07520 - 1445435..1445673 (+) 239 Protein_1428 polysaccharide deacetylase family protein -
  STCNRZ760_RS07525 - 1445722..1446000 (+) 279 WP_002948857.1 hypothetical protein -
  STCNRZ760_RS07530 (STCNRZ760_07465) - 1446016..1447272 (-) 1257 Protein_1430 ISL3-like element ISSth1 family transposase -
  STCNRZ760_RS07535 (STCNRZ760_07470) - 1447483..1448235 (+) 753 WP_002948852.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  STCNRZ760_RS07540 (STCNRZ760_07475) - 1448252..1448521 (+) 270 WP_002948849.1 GIY-YIG nuclease family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 24514.46 Da        Isoelectric Point: 4.6300

>NTDB_id=510323 STCNRZ760_RS07510 WP_082309090.1 1443386..1444081(-) (comEA) [Streptococcus thermophilus strain CNRZ760]
MKEKILAYVKDNRLFVSVIAVLMVIFCFFLWMTCGAGNSMEAETSYTDVTALSTSSSKQSSQSLSEASSQSKTEGSEKVK
SKVTVDVKGAVVNPGVYTLKAGARVTDVIQEAGGMTEDADAKSVNLAASLSDEEVIYVANKDENVSVLDQTGTGQVSDKG
GQAVSKDGKINLNTATSEQLQTISGIGAKRTEDIIAYRESHGGFQSVDDLKNVSGIGDKTLDKIRESLYVA

Nucleotide


Download         Length: 696 bp        

>NTDB_id=510323 STCNRZ760_RS07510 WP_082309090.1 1443386..1444081(-) (comEA) [Streptococcus thermophilus strain CNRZ760]
GTGAAGGAAAAGATTCTAGCCTATGTCAAAGATAATCGTCTGTTTGTGAGTGTCATCGCTGTACTGATGGTGATTTTTTG
CTTCTTTTTATGGATGACTTGTGGTGCCGGCAACAGCATGGAGGCGGAGACGTCTTATACAGATGTGACAGCTTTGTCAA
CGTCTTCATCCAAACAAAGTTCACAGTCTCTTTCTGAGGCGTCTTCCCAGTCAAAGACCGAAGGAAGTGAAAAAGTTAAG
TCAAAAGTAACGGTAGATGTTAAGGGGGCTGTGGTCAATCCAGGTGTCTATACGCTAAAGGCAGGCGCTAGGGTGACAGA
TGTCATTCAGGAAGCTGGAGGAATGACAGAAGATGCAGACGCTAAGAGTGTTAACTTAGCCGCAAGCTTGTCAGATGAAG
AGGTTATTTATGTAGCCAATAAAGATGAAAATGTTTCTGTCCTTGATCAAACAGGTACTGGTCAGGTCTCTGACAAAGGA
GGGCAGGCTGTATCTAAGGATGGCAAAATTAACTTAAATACAGCAACCTCAGAGCAGTTGCAAACCATTTCTGGAATTGG
AGCTAAGCGGACAGAGGATATCATTGCCTATCGTGAAAGTCATGGCGGCTTTCAGTCCGTAGATGACTTGAAAAATGTCT
CAGGAATTGGTGATAAAACATTAGATAAAATCAGAGAGTCCCTCTATGTGGCTTAA

Domains


Predicted by InterproScan.

(85-138)

(167-228)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Streptococcus thermophilus LMD-9

99.134

100

0.991

  comEA/celA/cilE Streptococcus mitis SK321

40.611

99.134

0.403

  comEA/celA/cilE Streptococcus pneumoniae D39

39.035

98.701

0.385

  comEA/celA/cilE Streptococcus pneumoniae R6

39.035

98.701

0.385

  comEA/celA/cilE Streptococcus pneumoniae Rx1

39.035

98.701

0.385

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

39.035

98.701

0.385

  comEA/celA/cilE Streptococcus mitis NCTC 12261

37.719

98.701

0.372