Detailed information NTG0509592

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: I5593_RS01435
• Genome accession: NZ_CP065432
• Coordinates: 307269..308327 (+)
• Length: 352 a.a.
• NCBI ID: WP_031950501.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ATCC 17961
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 302269..313327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5593_RS01420 (I5593_01420)	-	303375..303707 (+)	333	WP_000598371.1	hypothetical protein	-
I5593_RS01425 (I5593_01425)	-	303710..304534 (+)	825	WP_100223340.1	putative RNA methyltransferase	-
I5593_RS01430 (I5593_01430)	ponA	304552..307107 (-)	2556	WP_000736673.1	penicillin-binding protein PBP1a	-
I5593_RS01435 (I5593_01435)	pilM	307269..308327 (+)	1059	WP_031950501.1	pilus assembly protein PilM	Machinery gene
I5593_RS01440 (I5593_01440)	pilN	308327..308968 (+)	642	WP_000201223.1	PilN domain-containing protein	Machinery gene
I5593_RS01445 (I5593_01445)	pilO	308965..309705 (+)	741	WP_000076105.1	type 4a pilus biogenesis protein PilO	Machinery gene
I5593_RS01450 (I5593_01450)	pilP	309716..310243 (+)	528	WP_000695068.1	pilus assembly protein PilP	Machinery gene
I5593_RS01455 (I5593_01455)	pilQ	310306..312471 (+)	2166	WP_001017036.1	type IV pilus secretin PilQ	Machinery gene
I5593_RS01460 (I5593_01460)	aroK	312483..313052 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39014.55 Da
• Isoelectric Point: 4.4618

>NTDB_id=509592 I5593_RS01435 WP_031950501.1 307269..308327(+) (pilM) [Acinetobacter baumannii strain ATCC 17961]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPIGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=509592 I5593_RS01435 WP_031950501.1 307269..308327(+) (pilM) [Acinetobacter baumannii strain ATCC 17961]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATAGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCCTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423