Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | MY9_RS12440 | Genome accession | NC_017743 |
| Coordinates | 2464220..2464516 (-) | Length | 98 a.a. |
| NCBI ID | WP_003230162.1 | Uniprot ID | A0A809FGR8 |
| Organism | Bacillus sp. JS | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2459220..2469516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MY9_RS12395 (MY9_2484) | tasA | 2459637..2460422 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| MY9_RS12400 (MY9_2485) | - | 2460486..2461058 (-) | 573 | WP_014664587.1 | signal peptidase I | - |
| MY9_RS12405 (MY9_2486) | tapA | 2461042..2461797 (-) | 756 | WP_014664588.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MY9_RS12410 (MY9_2487) | - | 2462069..2462395 (+) | 327 | WP_014664589.1 | YqzG/YhdC family protein | - |
| MY9_RS12415 (MY9_2488) | - | 2462436..2462615 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| MY9_RS12420 (MY9_2489) | comGG | 2462687..2463061 (-) | 375 | WP_014664590.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| MY9_RS12425 (MY9_2490) | comGF | 2463062..2463442 (-) | 381 | WP_014664591.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| MY9_RS12430 (MY9_2491) | comGE | 2463468..2463815 (-) | 348 | WP_014664592.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| MY9_RS12435 (MY9_2492) | comGD | 2463799..2464230 (-) | 432 | WP_014664593.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| MY9_RS12440 (MY9_2493) | comGC | 2464220..2464516 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| MY9_RS12445 (MY9_2494) | comGB | 2464530..2465567 (-) | 1038 | WP_014664594.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| MY9_RS12450 (MY9_2495) | comGA | 2465554..2466624 (-) | 1071 | WP_041521378.1 | competence protein ComGA | Machinery gene |
| MY9_RS12460 (MY9_2497) | - | 2466836..2467246 (-) | 411 | WP_041521379.1 | CBS domain-containing protein | - |
| MY9_RS12465 (MY9_2498) | corA | 2467309..2468262 (-) | 954 | WP_014664598.1 | magnesium transporter CorA | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10849.74 Da Isoelectric Point: 6.7083
>NTDB_id=50617 MY9_RS12440 WP_003230162.1 2464220..2464516(-) (comGC) [Bacillus sp. JS]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=50617 MY9_RS12440 WP_003230162.1 2464220..2464516(-) (comGC) [Bacillus sp. JS]
ATGAATGAAAAAGGATTTACACTTGTTGAAATGTTGATCGTGCTCTTCATTATTTCCATATTGCTTTTAATTACAATACC
GAACGTGACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAAGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTGCAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCGCATTATCATCACTGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAAAAAGGATTTACACTTGTTGAAATGTTGATCGTGCTCTTCATTATTTCCATATTGCTTTTAATTACAATACC
GAACGTGACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAAGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTGCAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCGCATTATCATCACTGGCGGAGAAGTTAAGGTTGAACATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |