Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MY9_RS12450 | Genome accession | NC_017743 |
| Coordinates | 2465554..2466624 (-) | Length | 356 a.a. |
| NCBI ID | WP_041521378.1 | Uniprot ID | - |
| Organism | Bacillus sp. JS | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2460554..2471624
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MY9_RS12405 (MY9_2486) | tapA | 2461042..2461797 (-) | 756 | WP_014664588.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MY9_RS12410 (MY9_2487) | - | 2462069..2462395 (+) | 327 | WP_014664589.1 | YqzG/YhdC family protein | - |
| MY9_RS12415 (MY9_2488) | - | 2462436..2462615 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| MY9_RS12420 (MY9_2489) | comGG | 2462687..2463061 (-) | 375 | WP_014664590.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| MY9_RS12425 (MY9_2490) | comGF | 2463062..2463442 (-) | 381 | WP_014664591.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| MY9_RS12430 (MY9_2491) | comGE | 2463468..2463815 (-) | 348 | WP_014664592.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| MY9_RS12435 (MY9_2492) | comGD | 2463799..2464230 (-) | 432 | WP_014664593.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| MY9_RS12440 (MY9_2493) | comGC | 2464220..2464516 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| MY9_RS12445 (MY9_2494) | comGB | 2464530..2465567 (-) | 1038 | WP_014664594.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| MY9_RS12450 (MY9_2495) | comGA | 2465554..2466624 (-) | 1071 | WP_041521378.1 | competence protein ComGA | Machinery gene |
| MY9_RS12460 (MY9_2497) | - | 2466836..2467246 (-) | 411 | WP_041521379.1 | CBS domain-containing protein | - |
| MY9_RS12465 (MY9_2498) | corA | 2467309..2468262 (-) | 954 | WP_014664598.1 | magnesium transporter CorA | - |
| MY9_RS12470 (MY9_2499) | - | 2468405..2469733 (+) | 1329 | WP_040083766.1 | hemolysin family protein | - |
| MY9_RS12475 (MY9_2500) | rsbRD | 2469783..2470619 (-) | 837 | WP_014664600.1 | RsbT co-antagonist protein RsbRD | - |
| MY9_RS12485 (MY9_2501) | mgsR | 2470841..2471221 (-) | 381 | WP_014664601.1 | transcriptional regulator MgsR | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40427.63 Da Isoelectric Point: 9.1812
>NTDB_id=50619 MY9_RS12450 WP_041521378.1 2465554..2466624(-) (comGA) [Bacillus sp. JS]
MDSIEKISKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDDDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRAGVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKISKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDDDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRAGVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=50619 MY9_RS12450 WP_041521378.1 2465554..2466624(-) (comGA) [Bacillus sp. JS]
TTGGATTCAATAGAAAAGATAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGAGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGAACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCTGCAATGGACATAGGGGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTCCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCTCAATACAATATCCCTTCGATTGATAAACTGTCGTTATTTCCAAAGACAGGAGCCACATTACTCTCATTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACAACCACATTATACTCTCTGGTTCAATAC
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACTAGGGACGACGACGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAGGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGATGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGATGCAAAGGGCGCAATTTACAGGCTGCTTGAATTCGGTATCAATATGAATGAAATTGAACAGACCGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGTCCATTTTGTGAAAACGGATGTTCATCAGTATATTGCCGTCAGTCAC
GAAATACCAGAAGAGCTGGCGTTTATGAGCTTCTTTATGGGAAAAACCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACACTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGATAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGAGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGAACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCTGCAATGGACATAGGGGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTCCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCTCAATACAATATCCCTTCGATTGATAAACTGTCGTTATTTCCAAAGACAGGAGCCACATTACTCTCATTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACAACCACATTATACTCTCTGGTTCAATAC
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACTAGGGACGACGACGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAGGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGATGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGATGCAAAGGGCGCAATTTACAGGCTGCTTGAATTCGGTATCAATATGAATGAAATTGAACAGACCGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGTCCATTTTGTGAAAACGGATGTTCATCAGTATATTGCCGTCAGTCAC
GAAATACCAGAAGAGCTGGCGTTTATGAGCTTCTTTATGGGAAAAACCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACACTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
98.876 |
100 |
0.989 |
| pilB | Glaesserella parasuis strain SC1401 |
43.408 |
87.36 |
0.379 |
| pilF | Thermus thermophilus HB27 |
37.11 |
99.157 |
0.368 |