Detailed information NTG0501997

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: KNN06_RS15885
• Genome accession: NZ_CP076301
• Coordinates: 3289924..3291444 (-)
• Length: 506 a.a.
• NCBI ID: WP_029701888.1
• Uniprot ID: -
• Organism: Escherichia coli strain Survcare321
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 3284924..3296444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KNN06_RS15870 (KNN06_15870)	tnpA	3287974..3288432 (+)	459	WP_000526135.1	IS200/IS605-like element IS200C family transposase	-
KNN06_RS15875 (KNN06_15875)	hdfR	3288603..3289442 (-)	840	WP_000379230.1	HTH-type transcriptional regulator HdfR	-
KNN06_RS15880 (KNN06_15880)	maoP	3289561..3289899 (+)	339	WP_000841001.1	macrodomain Ori organization protein MaoP	-
KNN06_RS15885 (KNN06_15885)	comM	3289924..3291444 (-)	1521	WP_029701888.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
KNN06_RS15890 (KNN06_15890)	ilvL	3291797..3291895 (+)	99	WP_001311244.1	ilv operon leader peptide	-
KNN06_RS15895 (KNN06_15895)	ilvX	3291982..3292032 (+)	51	WP_001387183.1	peptide IlvX	-
KNN06_RS15900 (KNN06_15900)	ilvG	3292035..3293681 (+)	1647	WP_001012630.1	acetolactate synthase 2 catalytic subunit	-
KNN06_RS15905 (KNN06_15905)	ilvM	3293678..3293941 (+)	264	WP_000983255.1	acetolactate synthase 2 small subunit	-
KNN06_RS15910 (KNN06_15910)	ilvE	3293961..3294890 (+)	930	WP_000208520.1	branched-chain-amino-acid transaminase	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55315.43 Da
• Isoelectric Point: 7.3875

>NTDB_id=501997 KNN06_RS15885 WP_029701888.1 3289924..3291444(-) (comM) [Escherichia coli strain Survcare321]
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPSAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHL
QAVCAFLEGKHALERPKPTDAVSRALQHDLSDVVGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPG
ENSTTVKQRVMAARERQFKRQNKLNAWLDNPEIRQFCKLESEDAQWLEETLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

Nucleotide

• Length: 1521 bp

>NTDB_id=501997 KNN06_RS15885 WP_029701888.1 3289924..3291444(-) (comM) [Escherichia coli strain Survcare321]
ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCAATCACTGTTGAGGTACATATCAGTAA
AGGTCTACCCGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTAAAAGAAGCCCGCGATCGCGTGCGCAGCGCCATTA
TCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTTGCTCCAGCCGATCTGCCAAAAGAAGGGGGACGA
TATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAATTAGATGAATATGAATTAGT
CGGAGAACTAGCGCTTACAGGCGCTCTGCGTGGCGTTCCCAGCGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCA
GAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTG
CAGGCTGTCTGTGCGTTTCTGGAGGGTAAGCACGCTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACA
ACATGATCTCAGTGATGTTGTCGGTCAGGAGCAAGGAAAGCGAGGACTGGAAATTACCGCCGCTGGCGGGCACAACCTTT
TACTGATTGGGCCGCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTTTTGCCAGATTTAAGCAATGAA
GAGGCACTGGAGAGCGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCATTCCG
CTCACCGCATCACAGTGCGTCGTTAACTGCGATGGTGGGCGGTGGTGCAATTCCAGGGCCAGGTGAAATTTCGCTGGCGC
ATAACGGCGTGCTTTTTCTTGATGAGCTACCTGAATTTGAACGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCC
GGGCAGATCCATCTTTCACGCACACGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTTGCGGCGATGAATCCCAG
CCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACGCCAGAACAGACATTACGTTATCTCAACCGGCTCTCGGGGC
CCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCGCCCCCCGGCATTTTGAGTAAAACGGTAGTGCCGGGA
GAAAACAGCACCACCGTTAAACAACGTGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAACGCCTG
GCTGGATAATCCGGAAATACGCCAATTCTGCAAGCTTGAGAGCGAAGATGCGCAGTGGCTGGAAGAAACGCTGATCCATC
TGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACAATTGCTGATATTGATCAGTCTGACATTATC
ACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGTGCGATTGACCGTTTGCTCATCCATCTGCAAAAACTACTGACATA
A

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.121	100	0.587
comM	Glaesserella parasuis strain SC1401	58.383	100	0.585
comM	Vibrio cholerae strain A1552	58.566	99.209	0.581
comM	Vibrio cholerae O1 biovar El Tor strain E7946	58.566	99.209	0.581
comM	Vibrio campbellii strain DS40M4	57.57	99.209	0.571
comM	Acinetobacter baylyi ADP1	49.197	98.419	0.484
comM	Legionella pneumophila str. Paris	47.992	98.419	0.472
comM	Legionella pneumophila strain ERS1305867	47.992	98.419	0.472
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.874	100	0.439