Detailed information NTG0501456

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: IUJ52_RS10950
• Genome accession: NZ_CP064379
• Coordinates: 2337328..2340720 (-)
• Length: 1130 a.a.
• NCBI ID: WP_038152685.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain PartQ-Vfurnissii-RM8376
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2332328..2345720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IUJ52_RS10935 (IUJ52_10930)	-	2332780..2333805 (-)	1026	WP_004729001.1	ABC transporter permease	-
IUJ52_RS10940 (IUJ52_10935)	-	2333808..2334794 (-)	987	WP_004729000.1	ABC transporter permease	-
IUJ52_RS10945 (IUJ52_10940)	-	2334959..2336629 (-)	1671	WP_004728998.1	ABC transporter substrate-binding protein	-
IUJ52_RS10950 (IUJ52_10945)	chiS	2337328..2340720 (-)	3393	WP_038152685.1	response regulator	Regulator
IUJ52_RS10955 (IUJ52_10950)	rsmC	2340919..2341941 (-)	1023	WP_004728994.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
IUJ52_RS10960 (IUJ52_10955)	-	2342037..2343122 (-)	1086	WP_004728992.1	AI-2E family transporter	-
IUJ52_RS10965	-	2343159..2343320 (+)	162	WP_244794868.1	hypothetical protein	-
IUJ52_RS10970 (IUJ52_10960)	hemL	2343417..2344709 (-)	1293	WP_004728988.1	glutamate-1-semialdehyde 2,1-aminomutase	-
IUJ52_RS10975 (IUJ52_10965)	erpA	2345021..2345362 (+)	342	WP_004728986.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 128102.49 Da
• Isoelectric Point: 6.2694

>NTDB_id=501456 IUJ52_RS10950 WP_038152685.1 2337328..2340720(-) (chiS) [Vibrio furnissii strain PartQ-Vfurnissii-RM8376]
MFRFNRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVIDYLSAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGVDIDQAREHAQQRYVTGSGDEVKTSVLPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDITGNVVYSIYKRENYGTNLLTGRFKDSNLGQTFRQLEQQVSEHRKTNEDYTPVVLSDFVDEQGRQFAWMGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNTTSSMRTLLVGQDHRSRTLAYDQPEIDKSTQVIDWALNGSRSVGTYTNLDDEK
TIAAYAPINLKDLHWALVVELPEKEAFARIRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TMINTDRRDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQVIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALTSGANGPINAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIHRTAVNLSNATRLVLELSNHLLGKKQIRI
INQVAEEAPVWVSADAQRLEQVLYNLIGNAIKYTSEGKIVISATRVDQHIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDT
SRYRQGAGLGLSISRQLIELMQGSLYVSSQPMVGTTFSFTLPMASDDEIAQAQLTQQPHFQAPELTELDLPDHHSIPENP
TGPLLLVADDEPVNLRVLDSFLRLEGYRVRTAQDGNEVLQAVAEEKPELLLLDIMMPGMSGYQVCEELRKTYDHAALPVI
MLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAEQRRLENAELQKELKHRAMVEASLLETQGRLLEQL
ESAPEAIVCIREDNKVRFANDAAARLFKRSQEQLKRSNADELIGQKYLLVEQDHYCGNVDIFIDDTRQHVNADVLRLPKG
AGLQAMYIFNVGGNINAARIHNLETAVEALSSYAFDGDKDKLQQLKELGGEFTRLADKASGDGQSKQELMRSVLVDAMTS
ALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEQGPERTYIEVQR
DKLQKLLTSE

Nucleotide

• Length: 3393 bp

>NTDB_id=501456 IUJ52_RS10950 WP_038152685.1 2337328..2340720(-) (chiS) [Vibrio furnissii strain PartQ-Vfurnissii-RM8376]
ATGTTTAGGTTCAATCGGAAGCAAAAGTTTAAGCGCCTGCAAAATACCCTCATGCTCGCGTTCTTGGTTCTTAGCATCAC
CCCATTGACGGTGACGGCGATTTTTTTCCTTCAATCTCACAGTAAAGATCTTCAGGAACAAAGCACATCGCACCTTCTTT
CGGTCCGTGATACGAAACAACAGCAAGTCATCGACTACCTCAGCGCGAAAGAGTCTGAAGTCATGGGCTTTGTTCGCTCA
GAACTGGCTTACGCCAGTGGCGGGCGTTTCTATGGTTTAGTGAACGCATTTCAACGCTTAGGCGTTGATATCGACCAAGC
ACGAGAGCATGCACAGCAGCGTTACGTCACCGGTTCTGGTGATGAAGTCAAAACCTCCGTGCTACCAGAATCGAGCAGTT
ATGTCGGCAGTGAGCGCTATCGCCTCCTGCACAAACGCTACCATTGGGCCTATCTCGAGCTACTCAAACGGTCCGACTTT
GATGACATCCTGTTGGTCGATATCACCGGCAACGTGGTGTATTCCATCTACAAACGTGAGAACTACGGCACCAACTTGCT
CACGGGGCGATTCAAAGACAGTAACTTGGGGCAAACCTTCCGCCAGTTGGAACAGCAAGTCAGTGAGCATCGAAAAACCA
ACGAAGATTACACACCAGTGGTGTTGTCGGACTTTGTCGATGAACAAGGCCGTCAATTTGCTTGGATGGGCGCCCCCATT
ATTCAACAAGGCTATCTGCACAGCTACGCCATGTTCCGTTTACCCAACAACGGCATCACCAAGCTGATCGCAGACACCAA
CACCACGTCATCGATGCGCACGTTATTGGTCGGTCAGGATCATCGTTCACGCACGCTGGCTTATGATCAACCGGAAATCG
ATAAAAGTACGCAAGTGATTGATTGGGCGCTCAATGGCAGCCGATCCGTCGGCACGTACACCAACCTTGATGACGAGAAA
ACCATCGCCGCTTACGCGCCGATCAATCTCAAGGATCTGCATTGGGCGTTGGTGGTCGAACTGCCTGAAAAAGAAGCTTT
CGCACGCATTCGTCAACTGGAAAAACTGTTCATCTTCGCGATGCTGACTGCCATTATTTTGGTGGTGATTGCCTCACATT
ACCTATCGAATTTCATCACCTCACCCCTGCTAAAACTGACATGGGCCGCTGAACGCGTGTCGGCTGGTGATTTAGATGAA
ACCATGATCAACACCGATCGGCGTGATGAAATTGGGCGACTGGCGGTTAGTTTTGAACGCATGCAGCGCTCGATTCGCGA
AAAAATGCAGCTAATTAAGGCGCAGAATAAAGAGCTCGAAAGCAACATTCAGGTCATCCGTAAACAGAATGATGAGTTGC
AACTGGCCAACAAACTCAAAGATGAGTTTCTGGCCACAACATCCCATGAGCTGCGAACCCCGCTGCATGGCATGATCGGG
ATTGCCGAAGCACTGACTTCCGGCGCCAATGGCCCAATCAACGCTGCGCATAAGTATCAACTCGACATCATCATCAGCAG
CGGACAACGTTTGGCCACGCTGGTCGATGACCTACTCGATTACCACAAAATGCGTTATGGCAATCTGGATATTCATCGCA
CGGCTGTCAATCTCTCTAATGCCACACGTTTGGTTTTGGAGCTGTCAAATCACCTGTTGGGTAAAAAACAGATTCGCATC
ATCAATCAGGTCGCAGAAGAAGCGCCGGTATGGGTCTCTGCTGATGCGCAGCGTCTTGAGCAAGTGTTGTACAACTTGAT
TGGCAACGCGATCAAATACACCTCCGAAGGCAAGATTGTCATTTCTGCCACTCGCGTTGACCAACACATTCGCGTACAAG
TGGTGGATACCGGACAAGGGATTCCGGCAGAGCAATTGGAACATATTTTCGAACCCCTGATTCAAGCCGGGCACGACACC
AGTCGCTACCGCCAAGGGGCCGGACTGGGCCTCTCGATCAGCCGTCAGTTGATCGAGCTGATGCAAGGGTCGCTGTATGT
CAGCAGTCAACCCATGGTCGGAACGACGTTTAGCTTCACACTGCCGATGGCCTCTGACGACGAAATCGCCCAAGCGCAGT
TGACGCAACAACCGCACTTCCAAGCGCCTGAATTGACTGAACTGGATCTGCCAGACCATCACAGCATTCCGGAGAATCCA
ACCGGGCCGTTGCTCTTGGTGGCTGATGATGAGCCGGTGAACTTACGCGTGCTCGATAGCTTCCTGCGTCTTGAAGGCTA
TCGCGTGCGCACCGCTCAGGATGGGAACGAAGTCCTGCAGGCCGTCGCAGAAGAGAAACCTGAATTGTTGCTACTGGACA
TCATGATGCCCGGCATGAGCGGCTATCAGGTGTGTGAAGAGCTGCGTAAAACGTACGATCATGCAGCGTTGCCAGTCATC
ATGCTCACCGCGCTCAATCAATCCGATGACCGAGTGCGCGGCTTTGAAGCCGGCGCCAACGATTATCTATCCAAACCGTT
CAATAAGCAGGAATTAGCCGCCCGTATCGTCGCGCACCTGACCGCAAGTAAAGCGGAACAACGTCGCCTTGAGAACGCGG
AACTGCAAAAAGAACTCAAACATCGCGCCATGGTGGAAGCAAGCTTGCTGGAAACACAAGGCCGACTGCTGGAACAGCTG
GAATCCGCGCCAGAAGCGATTGTGTGCATTCGGGAAGACAACAAAGTTCGCTTTGCCAATGACGCCGCAGCGCGCCTGTT
TAAACGCAGTCAGGAACAGCTCAAACGCTCCAACGCTGACGAATTGATTGGGCAAAAATACTTATTGGTCGAACAGGATC
ACTATTGTGGCAATGTCGACATCTTCATCGACGACACGCGCCAACACGTGAACGCCGATGTCTTGCGCCTGCCCAAAGGT
GCTGGATTACAAGCGATGTATATCTTTAATGTCGGCGGTAACATTAACGCGGCGCGCATCCACAACCTTGAAACGGCGGT
TGAAGCCCTATCAAGTTACGCGTTTGACGGTGACAAAGATAAATTGCAACAGCTCAAAGAGCTGGGCGGTGAATTCACAC
GCTTAGCCGACAAAGCCTCCGGTGACGGCCAATCCAAACAAGAGTTGATGCGTTCCGTGCTGGTCGATGCCATGACCTCC
GCCCTCAACTACTGGGAAAGAGTCTCCGGTCAAAGCAAGTTCACCTTTGCTGAACAAAGTGGGCTGTGGCGCGTCTACCT
CGATCGCAGTACGCTGCAAACTCGAACACTCGACAAATACCTGCGTATCGAAACACTGCCTAAAACGCCGCGTTGGCGCA
CCGTGCTTAACTCGTTAGATTACATTCTGGATCACTGCCAGGAACAAGGACCAGAACGCACTTACATTGAAGTGCAACGG
GATAAGTTACAAAAGCTACTGACGTCAGAATAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (575-683)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	84.159	100	0.842