Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   IRJ26_RS01355 Genome accession   NZ_CP064094
Coordinates   239519..240640 (-) Length   373 a.a.
NCBI ID   WP_010886479.1    Uniprot ID   O31604
Organism   Bacillus subtilis strain N1108-5at     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 234519..245640
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IRJ26_RS01330 cwlQ 234658..235392 (+) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -
  IRJ26_RS01335 yjbI 235647..236045 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  IRJ26_RS01340 spxH 236042..236941 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  IRJ26_RS01345 - 237255..237422 (+) 168 WP_003244944.1 hypothetical protein -
  IRJ26_RS01350 pepF 237460..239289 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  IRJ26_RS01355 coiA 239519..240640 (-) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  IRJ26_RS01360 - 240714..240836 (+) 123 WP_003245684.1 hypothetical protein -
  IRJ26_RS01365 mecA 240831..241487 (-) 657 WP_003245194.1 adaptor protein MecA Regulator
  IRJ26_RS01370 - 241454..241594 (-) 141 WP_119122854.1 hypothetical protein -
  IRJ26_RS01375 yjbE 241764..242420 (+) 657 WP_003232944.1 TerC family protein -
  IRJ26_RS01380 spx 242463..242858 (-) 396 WP_003245483.1 transcriptional regulator Spx -
  IRJ26_RS01385 yjbC 243039..243617 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  IRJ26_RS01390 yjbB 243781..244998 (-) 1218 WP_010886478.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43689.70 Da        Isoelectric Point: 10.1187

>NTDB_id=499271 IRJ26_RS01355 WP_010886479.1 239519..240640(-) (coiA) [Bacillus subtilis strain N1108-5at]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRSECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=499271 IRJ26_RS01355 WP_010886479.1 239519..240640(-) (coiA) [Bacillus subtilis strain N1108-5at]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB O31604

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

100

1