Detailed information NTG0497640

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: KIH30_RS02915
• Genome accession: NZ_CP075343
• Coordinates: 697775..698428 (+)
• Length: 217 a.a.
• NCBI ID: WP_199208180.1
• Uniprot ID: A0ABT0VZK9
• Organism: Streptomyces sp. EMB24
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 692775..703428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KIH30_RS02880	-	692879..693304 (+)	426	WP_199208176.1	SsgA family sporulation/cell division regulator	-
KIH30_RS02885	-	693327..693827 (-)	501	WP_268219237.1	DUF6328 family protein	-
KIH30_RS02890	-	693957..694298 (+)	342	WP_086700192.1	hypothetical protein	-
KIH30_RS02895	-	694309..695292 (-)	984	WP_268219238.1	aldo/keto reductase	-
KIH30_RS02900	-	695355..696062 (-)	708	WP_048456587.1	ribonuclease H	-
KIH30_RS02905	-	696093..696887 (-)	795	WP_268219239.1	VOC family protein	-
KIH30_RS02910	-	697054..697539 (-)	486	WP_268219240.1	VOC family protein	-
KIH30_RS02915	clpP	697775..698428 (+)	654	WP_199208180.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KIH30_RS02920	clpP	698428..699030 (+)	603	WP_093768436.1	ATP-dependent Clp protease proteolytic subunit	Regulator
KIH30_RS02925	-	699085..699522 (-)	438	WP_308287781.1	helix-turn-helix transcriptional regulator	-
KIH30_RS02930	-	699799..700686 (+)	888	WP_268219241.1	SigB/SigF/SigG family RNA polymerase sigma factor	-
KIH30_RS02935	-	700773..701228 (-)	456	WP_048456580.1	ATP-binding protein	-
KIH30_RS02940	-	701655..702914 (+)	1260	WP_268219242.1	streptophobe family protein	-
KIH30_RS02945	-	702928..703338 (-)	411	WP_048456578.1	hypothetical protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23382.50 Da
• Isoelectric Point: 5.3057

>NTDB_id=497640 KIH30_RS02915 WP_199208180.1 697775..698428(+) (clpP) [Streptomyces sp. EMB24]
MSALIAGPGPGRPRAEDGDTPPTRFDDHLAAQLLAQRIVVLGTQVDEVSANRVCAQLLLLSAEDPRTDISLYVNSPGGSV
HAGLAIYDTMRLIPNDVATLAMGFAASMGQFLLCVGTPGKRYALPNARIMMHQPSGGIGGTAADIEIQAENLEFTKRTIE
RITAEHTGQSPETISRDGDRDRWFTAEQARAYGMVDRVLDSLDDVRPAATRPRMGLR

Nucleotide

• Length: 654 bp

>NTDB_id=497640 KIH30_RS02915 WP_199208180.1 697775..698428(+) (clpP) [Streptomyces sp. EMB24]
ATGTCAGCACTCATCGCCGGCCCCGGTCCGGGCCGGCCGCGGGCGGAGGACGGCGACACCCCGCCCACCCGCTTCGACGA
CCACCTCGCCGCCCAGCTGCTCGCGCAGCGGATCGTGGTGCTCGGCACCCAGGTCGACGAGGTGTCCGCGAACCGGGTGT
GCGCGCAGCTGCTGCTCCTGTCCGCCGAGGACCCGCGCACCGACATCAGCCTGTACGTCAACAGCCCCGGCGGCTCGGTG
CACGCCGGGCTCGCCATCTACGACACGATGCGGCTGATCCCCAACGACGTCGCCACCCTGGCCATGGGCTTCGCGGCCAG
CATGGGGCAGTTCCTGCTCTGTGTCGGCACGCCCGGCAAGCGCTACGCCCTGCCCAACGCGCGGATCATGATGCACCAGC
CGTCGGGCGGCATCGGCGGGACCGCCGCCGACATCGAGATCCAGGCGGAGAACCTGGAGTTCACCAAGCGGACCATCGAG
CGGATCACCGCCGAGCACACCGGCCAGTCCCCGGAGACCATCTCGCGGGACGGCGACCGGGACCGCTGGTTCACGGCCGA
GCAGGCCCGTGCGTACGGGATGGTCGACCGGGTGCTGGACTCGCTGGACGACGTCCGTCCGGCGGCCACCCGACCGAGGA
TGGGGCTGCGCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (29-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	49.438	82.028	0.406
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.977	79.724	0.382
clpP	Streptococcus pneumoniae Rx1	47.977	79.724	0.382
clpP	Streptococcus pneumoniae D39	47.977	79.724	0.382
clpP	Streptococcus pneumoniae R6	47.977	79.724	0.382
clpP	Streptococcus pneumoniae TIGR4	47.977	79.724	0.382
clpP	Lactococcus lactis subsp. cremoris KW2	46.857	80.645	0.378
clpP	Streptococcus pyogenes JRS4	46.857	80.645	0.378
clpP	Streptococcus pyogenes MGAS315	46.857	80.645	0.378
clpP	Streptococcus thermophilus LMG 18311	45.665	79.724	0.364
clpP	Streptococcus thermophilus LMD-9	45.665	79.724	0.364
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	45.143	80.645	0.364