Detailed information NTG0489763

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: IF725_RS13490
• Genome accession: NZ_CP062412
• Coordinates: 2739259..2739729 (+)
• Length: 156 a.a.
• NCBI ID: WP_000934760.1
• Uniprot ID: A0AAN2D761
• Organism: Staphylococcus aureus strain NAS_AN_181
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2734259..2744729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IF725_RS13450 (IF725_13390)	-	2734271..2734594 (+)	324	WP_001120201.1	DUF771 domain-containing protein	-
IF725_RS13455 (IF725_13395)	-	2734591..2734752 (+)	162	WP_000048132.1	DUF1270 family protein	-
IF725_RS13460 (IF725_13400)	-	2734847..2735149 (+)	303	WP_000165371.1	DUF2482 family protein	-
IF725_RS13465 (IF725_13405)	-	2735154..2735414 (+)	261	WP_000291510.1	DUF1108 family protein	-
IF725_RS13470 (IF725_13410)	-	2735423..2735686 (+)	264	WP_001205732.1	hypothetical protein	-
IF725_RS13475 (IF725_13415)	-	2735695..2737638 (+)	1944	WP_000700555.1	AAA family ATPase	-
IF725_RS13480 (IF725_13420)	-	2737640..2738560 (+)	921	WP_000138475.1	recombinase RecT	-
IF725_RS13485 (IF725_13425)	-	2738641..2739258 (+)	618	WP_071665632.1	MBL fold metallo-hydrolase	-
IF725_RS13490 (IF725_13430)	ssbA	2739259..2739729 (+)	471	WP_000934760.1	single-stranded DNA-binding protein	Machinery gene
IF725_RS13495 (IF725_13435)	-	2739759..2740652 (+)	894	WP_000148322.1	DnaD domain-containing protein	-
IF725_RS13500 (IF725_13440)	-	2740659..2740877 (+)	219	WP_000338530.1	hypothetical protein	-
IF725_RS13505 (IF725_13445)	-	2740886..2741290 (+)	405	WP_000401960.1	RusA family crossover junction endodeoxyribonuclease	-
IF725_RS13510 (IF725_13450)	-	2741303..2741671 (+)	369	WP_000101288.1	SA1788 family PVL leukocidin-associated protein	-
IF725_RS13515 (IF725_13455)	-	2741675..2741917 (+)	243	WP_000131389.1	SAV1978 family virulence-associated passenger protein	-
IF725_RS13520 (IF725_13460)	-	2741982..2742431 (+)	450	WP_000982711.1	YopX family protein	-
IF725_RS13525 (IF725_13465)	-	2742428..2742937 (+)	510	WP_001105599.1	hypothetical protein	-
IF725_RS13530 (IF725_13470)	-	2742934..2743344 (+)	411	WP_000197968.1	hypothetical protein	-
IF725_RS13535	-	2743370..2743462 (+)	93	Protein_2631	DUF1024 family protein	-
IF725_RS13540 (IF725_13480)	-	2743818..2744354 (+)	537	WP_001066443.1	dUTP diphosphatase	-
IF725_RS13545 (IF725_13485)	-	2744391..2744636 (+)	246	WP_001282074.1	hypothetical protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17641.52 Da
• Isoelectric Point: 5.2672

>NTDB_id=489763 IF725_RS13490 WP_000934760.1 2739259..2739729(+) (ssbA) [Staphylococcus aureus strain NAS_AN_181]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=489763 IF725_RS13490 WP_000934760.1 2739259..2739729(+) (ssbA) [Staphylococcus aureus strain NAS_AN_181]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.932	100	0.635
ssb	Latilactobacillus sakei subsp. sakei 23K	50.588	100	0.551
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	67.949	0.404
ssb	Glaesserella parasuis strain SC1401	32.768	100	0.372
ssb	Neisseria meningitidis MC58	32.948	100	0.365
ssb	Neisseria gonorrhoeae MS11	32.948	100	0.365