Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | IF761_RS13365 | Genome accession | NZ_CP062329 |
| Coordinates | 2713299..2713769 (+) | Length | 156 a.a. |
| NCBI ID | WP_000610649.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NAS_OP_026 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2708299..2718769
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF761_RS13325 (IF761_13250) | - | 2708316..2708636 (+) | 321 | WP_001120936.1 | DUF771 domain-containing protein | - |
| IF761_RS13330 (IF761_13255) | - | 2708633..2708794 (+) | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| IF761_RS13335 (IF761_13260) | - | 2708887..2709189 (+) | 303 | WP_016170555.1 | DUF2482 family protein | - |
| IF761_RS13340 (IF761_13265) | - | 2709194..2709454 (+) | 261 | WP_000291504.1 | DUF1108 family protein | - |
| IF761_RS13345 (IF761_13270) | - | 2709463..2709726 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| IF761_RS13350 (IF761_13275) | - | 2709735..2711678 (+) | 1944 | WP_023604913.1 | AAA family ATPase | - |
| IF761_RS13355 (IF761_13280) | - | 2711680..2712600 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| IF761_RS13360 (IF761_13285) | - | 2712681..2713298 (+) | 618 | WP_077517322.1 | MBL fold metallo-hydrolase | - |
| IF761_RS13365 (IF761_13290) | ssbA | 2713299..2713769 (+) | 471 | WP_000610649.1 | single-stranded DNA-binding protein | Machinery gene |
| IF761_RS13370 (IF761_13295) | - | 2713799..2714650 (+) | 852 | WP_218702631.1 | DnaD domain protein | - |
| IF761_RS13375 (IF761_13300) | - | 2714657..2714875 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| IF761_RS13380 (IF761_13305) | - | 2714884..2715289 (+) | 406 | Protein_2599 | RusA family crossover junction endodeoxyribonuclease | - |
| IF761_RS13385 (IF761_13310) | - | 2715302..2715670 (+) | 369 | WP_023604910.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF761_RS13390 (IF761_13315) | - | 2715674..2715916 (+) | 243 | WP_023604909.1 | phi PVL orf 51-like protein | - |
| IF761_RS13395 (IF761_13320) | - | 2715925..2716275 (+) | 351 | WP_025176279.1 | hypothetical protein | - |
| IF761_RS13400 (IF761_13325) | - | 2716268..2716519 (+) | 252 | WP_001065046.1 | DUF1024 family protein | - |
| IF761_RS13405 (IF761_13330) | - | 2716509..2716682 (+) | 174 | WP_000028424.1 | hypothetical protein | - |
| IF761_RS13410 | - | 2716683..2716835 (+) | 153 | WP_016170781.1 | hypothetical protein | - |
| IF761_RS13415 (IF761_13340) | - | 2716965..2717126 (+) | 162 | WP_000889682.1 | hypothetical protein | - |
| IF761_RS13420 (IF761_13345) | - | 2717141..2717674 (+) | 534 | WP_023604907.1 | dUTPase | - |
| IF761_RS13425 (IF761_13350) | - | 2717711..2717917 (+) | 207 | WP_000195794.1 | DUF1381 domain-containing protein | - |
| IF761_RS13430 (IF761_13355) | - | 2717914..2718117 (+) | 204 | WP_000141180.1 | hypothetical protein | - |
| IF761_RS13435 (IF761_13360) | - | 2718110..2718346 (+) | 237 | WP_000608275.1 | hypothetical protein | - |
| IF761_RS13440 (IF761_13365) | - | 2718339..2718725 (+) | 387 | WP_000592202.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17716.59 Da Isoelectric Point: 4.9816
>NTDB_id=487848 IF761_RS13365 WP_000610649.1 2713299..2713769(+) (ssbA) [Staphylococcus aureus strain NAS_OP_026]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNTNDNQQDLYKQQAQQSRGQSQYPYNKPVKDNPFANANDPIEIDDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVVADSIQFLEPKNTNDNQQDLYKQQAQQSRGQSQYPYNKPVKDNPFANANDPIEIDDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=487848 IF761_RS13365 WP_000610649.1 2713299..2713769(+) (ssbA) [Staphylococcus aureus strain NAS_OP_026]
ATGATAAATAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGATTTTATTAATGTCATTGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CACAAATGATAATCAACAAGATTTATACAAACAACAAGCGCAACAATCACGTGGACAGTCTCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTCGCAAATGCGAATGATCCTATTGAAATAGATGACGATGATTTACCATTCTAA
ATGATAAATAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCGGTTAACCGTACATTTACGAATGCACAAGGCGAGCGCGAGGCAGATTTTATTAATGTCATTGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTGTTGCCGATAGTATTCAATTTTTAGAACCGAAGAA
CACAAATGATAATCAACAAGATTTATACAAACAACAAGCGCAACAATCACGTGGACAGTCTCAATATCCATATAACAAAC
CAGTAAAAGATAATCCGTTCGCAAATGCGAATGATCCTATTGAAATAGATGACGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.529 |
100 |
0.583 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Vibrio cholerae strain A1552 |
33.14 |
100 |
0.365 |
| ssb | Neisseria meningitidis MC58 |
32.948 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
32.948 |
100 |
0.365 |