Detailed information NTG0483441

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC788_RS09945
• Genome accession: NZ_CP061596
• Coordinates: 2126566..2127381 (-)
• Length: 271 a.a.
• NCBI ID: WP_191000186.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS59
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2121566..2132381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC788_RS09915 (IC788_09915)	-	2121874..2122314 (-)	441	WP_004701967.1	SRPBCC family protein	-
IC788_RS09920 (IC788_09920)	tadA	2122386..2122888 (-)	503	Protein_1944	tRNA adenosine(34) deaminase TadA	-
IC788_RS09925 (IC788_09925)	-	2122896..2124020 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC788_RS09930 (IC788_09930)	ung	2124017..2124730 (-)	714	WP_004701973.1	uracil-DNA glycosylase	-
IC788_RS09935 (IC788_09935)	-	2124781..2125377 (-)	597	WP_191000184.1	6-pyruvoyl trahydropterin synthase family protein	-
IC788_RS09940 (IC788_09940)	gspK	2125607..2126566 (-)	960	WP_191000185.1	type II secretion system minor pseudopilin GspK	-
IC788_RS09945 (IC788_09945)	xcpW	2126566..2127381 (-)	816	WP_191000186.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC788_RS09950 (IC788_09950)	xcpV	2127381..2127761 (-)	381	WP_191000187.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC788_RS09955 (IC788_09955)	-	2127751..2128302 (-)	552	WP_004701984.1	type II secretion system protein	-
IC788_RS09960 (IC788_09960)	-	2128312..2128920 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC788_RS09965 (IC788_09965)	-	2128958..2129731 (-)	774	WP_191000188.1	TatD family hydrolase	-
IC788_RS09970 (IC788_09970)	-	2129749..2130090 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
IC788_RS09975 (IC788_09975)	-	2130103..2131083 (-)	981	WP_191000189.1	DNA polymerase III subunit delta'	-
IC788_RS09980 (IC788_09980)	kdsB	2131095..2131856 (-)	762	WP_191000190.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30654.94 Da
• Isoelectric Point: 9.7403

>NTDB_id=483441 IC788_RS09945 WP_191000186.1 2126566..2127381(-) (xcpW) [Acinetobacter seifertii strain AS59]
MIKNKYFCTRSKVSRLTARSGIVSTDYSEHSSSSYAQTKRCFSDSHTRKTVSHLAARSSSARLARASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQVMVLTPQEVTKWPEVNIDPTKPNDLKKLPKG
IKIQITVAGVSYEWIYSLNQSNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483441 IC788_RS09945 WP_191000186.1 2126566..2127381(-) (xcpW) [Acinetobacter seifertii strain AS59]
ATGATAAAAAATAAGTACTTTTGCACCCGAAGCAAAGTTTCACGTCTTACGGCACGATCAGGTATTGTGTCGACTGACTA
CTCAGAGCATAGCTCTTCGTCTTACGCTCAGACAAAGCGCTGTTTTAGTGATTCTCACACTCGAAAAACTGTTTCTCATC
TTGCGGCGCGATCGAGCAGTGCTCGATTAGCTCGCGCCTCAGGATTTACGTTGGTTGAGTTATTGGTTGCGATTGCTATT
TTCGCGGTATTATCTTTATTGGGATGGAAAATATTCGATTATTTGCTTAAGGTCCGTGATCGTAACGCCGAACATGAAGT
GCATTTATTTGAATTACAAGATGCTTATCAACAAATTCTTCGTGATACTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGGCAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTACGTTTTAGCAAAGCAGGCGTAACTGATCCTTTAAAA
CAGGGGTTATCACCATTTGAACGAATTGAATATCGTTATGATGCTGACCAAAAAAAACTATATCGTCTTAAATATACAAA
TTTAAATACTTCGAATAACGAGCAACCTTTATCAAGTACCTTACTAAGTCAAGTTGACCAATATCAGGTTATGGTTTTAA
CTCCGCAAGAAGTAACAAAATGGCCCGAAGTTAATATTGATCCAACAAAACCTAACGATTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAAATTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTGAATCAAAGCAATTTAGCACTTTCCCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	92.92	83.395	0.775