Detailed information NTG0483365

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC791_RS08670
• Genome accession: NZ_CP061582
• Coordinates: 1810901..1811716 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS62
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1805901..1816716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC791_RS08635 (IC791_08630)	kdsB	1806426..1807187 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC791_RS08640 (IC791_08635)	-	1807199..1808179 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC791_RS08645 (IC791_08640)	-	1808192..1808533 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC791_RS08650 (IC791_08645)	-	1808551..1809324 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC791_RS08655 (IC791_08650)	-	1809362..1809970 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC791_RS08660 (IC791_08655)	-	1809980..1810531 (+)	552	WP_004701984.1	type II secretion system protein	-
IC791_RS08665 (IC791_08660)	xcpV	1810521..1810901 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC791_RS08670 (IC791_08665)	xcpW	1810901..1811716 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC791_RS08675 (IC791_08670)	gspK	1811716..1812672 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC791_RS08680 (IC791_08675)	-	1812902..1813498 (+)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC791_RS08685 (IC791_08680)	ung	1813549..1814262 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC791_RS08690 (IC791_08685)	-	1814259..1815383 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC791_RS08695 (IC791_08690)	tadA	1815391..1815894 (+)	504	WP_031944487.1	tRNA adenosine(34) deaminase TadA	-
IC791_RS08700 (IC791_08695)	-	1815964..1816404 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483365 IC791_RS08670 WP_077168510.1 1810901..1811716(+) (xcpW) [Acinetobacter seifertii strain AS62]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483365 IC791_RS08670 WP_077168510.1 1810901..1811716(+) (xcpW) [Acinetobacter seifertii strain AS62]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79