Detailed information NTG0483269

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: IC793_RS01835
• Genome accession: NZ_CP061571
• Coordinates: 373953..375011 (+)
• Length: 352 a.a.
• NCBI ID: WP_191036737.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS70
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 368953..380011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC793_RS01820 (IC793_01820)	-	370059..370391 (+)	333	WP_004705180.1	hypothetical protein	-
IC793_RS01825 (IC793_01825)	-	370394..371218 (+)	825	WP_151682784.1	putative RNA methyltransferase	-
IC793_RS01830 (IC793_01830)	ponA	371236..373791 (-)	2556	WP_039251098.1	penicillin-binding protein PBP1a	-
IC793_RS01835 (IC793_01835)	pilM	373953..375011 (+)	1059	WP_191036737.1	pilus assembly protein PilM	Machinery gene
IC793_RS01840 (IC793_01840)	pilN	375011..375655 (+)	645	WP_151682783.1	PilN domain-containing protein	Machinery gene
IC793_RS01845 (IC793_01845)	pilO	375652..376392 (+)	741	WP_151682782.1	type 4a pilus biogenesis protein PilO	Machinery gene
IC793_RS01850 (IC793_01850)	pilP	376403..376930 (+)	528	WP_151682781.1	pilus assembly protein PilP	Machinery gene
IC793_RS01855 (IC793_01855)	pilQ	376992..379103 (+)	2112	WP_151682780.1	type IV pilus secretin PilQ family protein	Machinery gene
IC793_RS01860 (IC793_01860)	aroK	379115..379684 (+)	570	WP_151682779.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39028.54 Da
• Isoelectric Point: 4.4622

>NTDB_id=483269 IC793_RS01835 WP_191036737.1 373953..375011(+) (pilM) [Acinetobacter seifertii strain AS70]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYAFMPLPENSVVEKNILNPEAVAEALERAINLANPQTKNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANSNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGVLDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=483269 IC793_RS01835 WP_191036737.1 373953..375011(+) (pilM) [Acinetobacter seifertii strain AS70]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTAGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTTGAAAGCTACGCTTTTATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTAGCGGAAGCATTGGAAAGGGCGATTAACTTAGCAAATCCCCAAACCAAAAATGCTGCAATT
GCTGTTCCTACATCGACTGTTATTCATAAAACTATCGAGATGGATGCGGATATGAGCGATGATGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTAGATTTTGAGGTTCTACCTGACCGGCTTG
CGAATTCAAATCGTGTAAATGTACTCTTAGTCGCAACAAGAACGGAAAACGTAGAAACGCGCGTTGAGGTTCTTGAGTTG
GCAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTATGCTGTTGAGCGCGCATTTAGTGTGTTTGCTGATAGCTTACC
TATGGGTGCAAATACGATAGGGGTTTTAGATATTGGCCATACCATGACAACATTGTCTGTCATGCAAAACGGCAAAATTA
TTTATACCCGTGAGCAAGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAG
GCAAGTCGAGCGAAAAAAGATCGTTCTTTACCAGATGACTATGAAATTGAAGTATTAGATCCGTTTCTAGATGCTGTAGT
TCAGCAAGCGGCTCGCTCTTTACAATTCTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATCCTGCTTGCAGGCG
GAAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACTATTGCCAATCCATTTTTA
CAGATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCTTTAATGGTGGCGTGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	98.295	100	0.983
comM	Acinetobacter nosocomialis M2	98.011	100	0.98
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.655	100	0.429