Detailed information NTG0482932

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: J7T60_RS09395
• Genome accession: NZ_CP072436
• Coordinates: 1783020..1784120 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain S24735
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1778020..1789120

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T60_RS09370 (J7T60_09280)	pgsA	1778562..1779104 (-)	543	WP_179971111.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
J7T60_RS09375 (J7T60_09285)	-	1779117..1779974 (-)	858	WP_002947779.1	helix-turn-helix transcriptional regulator	-
J7T60_RS09380 (J7T60_09290)	yfmH	1780033..1781310 (-)	1278	WP_232980791.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
J7T60_RS09385 (J7T60_09295)	yfmF	1781312..1782562 (-)	1251	WP_180477205.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
J7T60_RS09390 (J7T60_09300)	yaaA	1782640..1783017 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
J7T60_RS09395 (J7T60_09305)	recF	1783020..1784120 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
J7T60_RS09400 (J7T60_09310)	guaB	1784289..1785770 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
J7T60_RS09405 (J7T60_09315)	trpS	1785947..1786969 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
J7T60_RS09410 (J7T60_09320)	-	1787396..1788268 (+)	873	WP_064355694.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=482932 J7T60_RS09395 WP_002947786.1 1783020..1784120(+) (recF) [Streptococcus thermophilus strain S24735]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=482932 J7T60_RS09395 WP_002947786.1 1783020..1784120(+) (recF) [Streptococcus thermophilus strain S24735]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432