Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   NMBM01240355_RS04830 Genome accession   NC_017517
Coordinates   934586..935197 (+) Length   203 a.a.
NCBI ID   WP_041423359.1    Uniprot ID   -
Organism   Neisseria meningitidis M01-240355     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 929586..940197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM01240355_RS04815 (NMBM01240355_0882) - 931420..932007 (-) 588 WP_014581927.1 superoxide dismutase -
  NMBM01240355_RS04820 (NMBM01240355_0883) dnaB 932170..933576 (+) 1407 WP_002213843.1 replicative DNA helicase -
  NMBM01240355_RS04825 (NMBM01240355_0884) pilH 933885..934562 (+) 678 WP_002213841.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  NMBM01240355_RS04830 (NMBM01240355_0885) pilV 934586..935197 (+) 612 WP_041423359.1 type IV pilus modification protein PilV Machinery gene
  NMBM01240355_RS04835 (NMBM01240355_0886) pilJ 935194..936132 (+) 939 WP_041423360.1 PilW family protein Machinery gene
  NMBM01240355_RS04840 (NMBM01240355_0887) pilK 936111..936704 (+) 594 WP_014581931.1 pilus assembly protein Machinery gene
  NMBM01240355_RS04845 (NMBM01240355_0888) pilX 936709..937182 (+) 474 WP_014581932.1 PilX family type IV pilin Machinery gene
  NMBM01240355_RS04850 (NMBM01240355_0889) - 938446..938871 (-) 426 Protein_917 AzlC family ABC transporter permease -
  NMBM01240355_RS04855 (NMBM01240355_0890) dut 939013..939465 (+) 453 WP_014581934.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22116.95 Da        Isoelectric Point: 4.9868

>NTDB_id=48104 NMBM01240355_RS04830 WP_041423359.1 934586..935197(+) (pilV) [Neisseria meningitidis M01-240355]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHTLSAVDGDFQVDAIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTFSGNAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=48104 NMBM01240355_RS04830 WP_041423359.1 934586..935197(+) (pilV) [Neisseria meningitidis M01-240355]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCGTTACTGTCTGTGCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATACACTATCAGCTGTGGATGGCGATTTTCAGGTTGATGCCATAAAAACTAAGAC
GCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCATTACG
CCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTCTCCGGCAATGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCTTGAGGTGAG
CGGCGACAATATCGTATATACTTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

94.66

100

0.961
  pilI Neisseria gonorrhoeae MS11

84.236

100

0.842
  pilV Neisseria gonorrhoeae MS11

84.236

100

0.842

Multiple sequence alignment