Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   NMBM01240355_RS02295 Genome accession   NC_017517
Coordinates   433324..434820 (+) Length   498 a.a.
NCBI ID   WP_002216507.1    Uniprot ID   -
Organism   Neisseria meningitidis M01-240355     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 428324..439820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM01240355_RS15260 - 430724..430891 (+) 168 WP_009346312.1 hypothetical protein -
  NMBM01240355_RS02280 (NMBM01240355_0410) putP 430981..432507 (-) 1527 WP_002242311.1 sodium/proline symporter PutP -
  NMBM01240355_RS02290 (NMBM01240355_0411) - 432990..433310 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMBM01240355_RS02295 (NMBM01240355_0412) comM 433324..434820 (+) 1497 WP_002216507.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMBM01240355_RS02300 (NMBM01240355_0413) ftsN 434926..435771 (+) 846 WP_014581790.1 cell division protein FtsN -
  NMBM01240355_RS02305 (NMBM01240355_0414) dsbA1 435774..436418 (+) 645 WP_014581791.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMBM01240355_RS02310 (NMBM01240355_0415) - 436451..437272 (+) 822 WP_002222025.1 undecaprenyl-diphosphate phosphatase -
  NMBM01240355_RS02325 (NMBM01240355_0418) - 437845..439035 (-) 1191 WP_162467412.1 class I SAM-dependent methyltransferase -
  NMBM01240355_RS02330 (NMBM01240355_0419) mraZ 439341..439796 (+) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53586.60 Da        Isoelectric Point: 6.7790

>NTDB_id=48093 NMBM01240355_RS02295 WP_002216507.1 433324..434820(+) (comM) [Neisseria meningitidis M01-240355]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQVAPEKLEEYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSASAAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGESSASVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEALGGLLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVMKAIGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=48093 NMBM01240355_RS02295 WP_002216507.1 433324..434820(+) (comM) [Neisseria meningitidis M01-240355]
ATGTCGCTTGCCTTGGTTTACAGCCGCGCCTTGAGCGGTATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGCCTGCCACATTTCAACATCGTCGGGCTGCCCGATACGGAAGTCAAAGAAAGTCGCGACCGCGTCCGTGCCGCCATTA
TTCAAAGCGGTTTTGAATTCCCCGCCAAAAAAATCACCGTCAACCTCGCCCCCGCCGACCTGCCCAAAGAGTCGGGGCGT
TTCGATTTGCCGATTGCAATCGGCATCCTTGCCGCATCGGGGCAGGTTGCGCCCGAAAAACTGGAGGAATACGAGTTTGC
GGGGGAATTGGCACTGTCGGGGCTGTTGCGCCCCGTGCGTGGCGCGTTGGCGATGGCGTGGCAGGGTATGCAGGCAAAAC
GTGCATTTGTTTTGCCTGAAGAAAATGCAGGACAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGCGCGCGCTCTTTG
GGCGAAGTCGCCGCCCATTTGAACGGCATCGAACCTTTGGCGCAAACCGAATGCCAAGTTCCTCAGATGCCGTTTGAACA
TGGCGGACAACCTGATTTGTGCGATGTGAAAGGTCAGCACACCGCGCGCCTTGCTTTGGAAATCGCTGCCGCAGGCGGAC
ACAGCCTCTTGATGATGGGTCCGCCGGGAACGGGCAAGTCTATGCTCTCCCAACGGCTGCCCGGCATCCTGCCGCCGCTG
ACCGAAGACGAATTGGTAGAAGTTTGGGCATTGCGTTCGCTCCTGCCCAACCACCAACAACAACTCGACAGCAACCGTCC
TTTCCGCAGTCCGCATCACAGCGCCAGCGCGGCGGCTATGGTCGGCGGCGGTTCGGATCCGCGTCCGGGCGAAATTTCAT
TGGCGCACCACGGCGTTTTGTTTTTGGACGAGCTGCCCGAGTTTGACCGCAAAGTTTTGGAAGTTTTGCGCGAACCGTTG
GAAAACGGCGAAATCCACATTTCCCGCGCGGCGCGCCAAGCCGTCTATCCCGCCAAATTCCAACTTGTCGCCGCCATGAA
CCCCTGCCCGTGCGGTTATCTCGGGCATCCCGTCAAACCCTGCCGCTGCACGCCCGAAAGCGTCGCGCGTTACCGCAGCA
AGATTTCCGGGCCGCTGCTCGACCGCATCGATTTGACCATCGAAGTCCCGAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCAGGGGAAAGCAGCGCGTCCGTTTTGGAACGCGTTATCGCCGCTAGAGACAAACAATACGCACGGCAAGGCAAAGT
GAATGCCGCCTTGAGTGTCAGTGAACTCGACACATCCGCCCGCATTCAAAAAGAAGCGCAGGAAGCATTGGGCGGCCTGC
TGGAAAAACTCTCCCTTTCCGCCCGCAGCTTCCACCGCATTATGCGCGTGGCGCGTACATTGGCGGATTTGGCGGGCGAC
GAAGAAGTCGGCAGAAGCCACGTCATGAAAGCCATAGGTTTCCGTCGTGCTTTATAG

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.187

100

0.536
  comM Vibrio campbellii strain DS40M4

52.314

99.799

0.522
  comM Haemophilus influenzae Rd KW20

49.9

100

0.5
  comM Glaesserella parasuis strain SC1401

49.008

100

0.496
  comM Legionella pneumophila str. Paris

46.337

100

0.47
  comM Legionella pneumophila strain ERS1305867

46.337

100

0.47
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

43.026

100

0.44

Multiple sequence alignment