Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMBM01240355_RS02305 Genome accession   NC_017517
Coordinates   435774..436418 (+) Length   214 a.a.
NCBI ID   WP_014581791.1    Uniprot ID   -
Organism   Neisseria meningitidis M01-240355     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 430774..441418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM01240355_RS02280 (NMBM01240355_0410) putP 430981..432507 (-) 1527 WP_002242311.1 sodium/proline symporter PutP -
  NMBM01240355_RS02290 (NMBM01240355_0411) - 432990..433310 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMBM01240355_RS02295 (NMBM01240355_0412) comM 433324..434820 (+) 1497 WP_002216507.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMBM01240355_RS02300 (NMBM01240355_0413) ftsN 434926..435771 (+) 846 WP_014581790.1 cell division protein FtsN -
  NMBM01240355_RS02305 (NMBM01240355_0414) dsbA1 435774..436418 (+) 645 WP_014581791.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMBM01240355_RS02310 (NMBM01240355_0415) - 436451..437272 (+) 822 WP_002222025.1 undecaprenyl-diphosphate phosphatase -
  NMBM01240355_RS02325 (NMBM01240355_0418) - 437845..439035 (-) 1191 WP_162467412.1 class I SAM-dependent methyltransferase -
  NMBM01240355_RS02330 (NMBM01240355_0419) mraZ 439341..439796 (+) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -
  NMBM01240355_RS02335 (NMBM01240355_0420) rsmH 439793..440779 (+) 987 WP_002238769.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  NMBM01240355_RS02340 (NMBM01240355_0421) ftsL 440776..441039 (+) 264 WP_002232818.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23861.77 Da        Isoelectric Point: 9.3952

>NTDB_id=48094 NMBM01240355_RS02305 WP_014581791.1 435774..436418(+) (dsbA1) [Neisseria meningitidis M01-240355]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKVHLEDRAVAGKWALSQKGFDGKKLMRVYDSPEAAAAASKMQK
LTEQYGIDNTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQPPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=48094 NMBM01240355_RS02305 WP_014581791.1 435774..436418(+) (dsbA1) [Neisseria meningitidis M01-240355]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCCGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAGAAGGTTCATTTGGAAGACAGGGCGGTGGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGTAAAAAACTGATGCGCGTTTATGACTCTCCCGAGGCCGCAGCAGCAGCATCAAAAATGCAGAAA
CTGACAGAACAATACGGTATTGACAACACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGCCCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.615

87.383

0.486
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment