Detailed information NTG0480250

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: IBL27_RS05275
• Genome accession: NZ_CP061071
• Coordinates: 1057818..1058660 (-)
• Length: 280 a.a.
• NCBI ID: WP_002309562.1
• Uniprot ID: -
• Organism: Streptococcus mutans B04Sm5
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1052818..1063660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBL27_RS05265 (IBL27_05265)	trmFO	1053906..1055240 (-)	1335	WP_002309566.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
IBL27_RS05270 (IBL27_05270)	topA	1055606..1057723 (-)	2118	WP_002287969.1	type I DNA topoisomerase	-
IBL27_RS05275 (IBL27_05275)	dprA	1057818..1058660 (-)	843	WP_002309562.1	DNA-processing protein DprA	Machinery gene
IBL27_RS05280 (IBL27_05280)	-	1058827..1059108 (-)	282	WP_002309560.1	hypothetical protein	-
IBL27_RS05285 (IBL27_05285)	-	1059180..1060196 (-)	1017	WP_002309558.1	siderophore ABC transporter substrate-binding protein	-
IBL27_RS05290 (IBL27_05290)	-	1060244..1061050 (-)	807	WP_002270389.1	ABC transporter ATP-binding protein	-
IBL27_RS05295 (IBL27_05295)	-	1061047..1062018 (-)	972	WP_002270388.1	iron chelate uptake ABC transporter family permease subunit	-
IBL27_RS05300 (IBL27_05300)	-	1062015..1062977 (-)	963	WP_002270387.1	ABC transporter permease	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31360.28 Da
• Isoelectric Point: 9.2010

>NTDB_id=480250 IBL27_RS05275 WP_002309562.1 1057818..1058660(-) (dprA) [Streptococcus mutans B04Sm5]
MDNFQLFKLKKAGLTNLNILNIIDYEERTQRSLSLRDMAVVSKNKKPLIFMEHYKNLDSKALRKEFNRFPSLSILDKEYP
LELKNIYNPPVLLFYQGDLDLLARPKLAVVGSRNASQMGVAAVKKIIQDLSKQFVIISGLARGIDTAAHLASLKSGGATI
AVIGTGLDVHYPKENRRLQDYIAKNHLLLSEYEAQSQPLKYHFPERNRIIAGLSQGVMVAEAKIRSGSLITCERAMEEGR
DVFVVPGNILDGQSEGCHHLIQEGAKCITSGFDILNEFNF

Nucleotide

• Length: 843 bp

>NTDB_id=480250 IBL27_RS05275 WP_002309562.1 1057818..1058660(-) (dprA) [Streptococcus mutans B04Sm5]
ATGGATAATTTTCAACTATTTAAACTTAAAAAAGCTGGTCTAACAAATCTGAATATCTTAAATATTATTGATTATGAAGA
GAGGACACAAAGATCCTTGTCTCTTCGTGATATGGCTGTTGTTTCCAAAAATAAAAAGCCTTTAATTTTTATGGAACATT
ACAAGAATCTTGATAGCAAAGCATTACGCAAAGAATTTAATCGTTTTCCTTCTTTATCCATTTTGGACAAAGAATATCCC
TTGGAACTTAAAAATATTTATAATCCGCCTGTTCTTCTATTTTATCAGGGAGACTTAGACTTGCTAGCTCGGCCTAAATT
AGCAGTAGTTGGTTCTCGCAACGCCAGTCAAATGGGAGTAGCTGCTGTTAAAAAGATCATACAAGACTTAAGTAAGCAAT
TTGTTATTATTAGCGGTTTAGCGCGTGGTATTGATACTGCAGCACATTTAGCAAGTCTTAAAAGCGGTGGAGCAACAATT
GCGGTCATCGGTACTGGACTAGATGTTCATTATCCTAAAGAAAATCGAAGACTGCAGGATTATATTGCAAAGAATCATTT
GCTCTTATCAGAATATGAAGCACAGAGTCAACCTCTTAAGTATCATTTTCCTGAGCGGAACCGCATTATTGCTGGGTTAT
CTCAAGGTGTTATGGTAGCAGAAGCAAAAATTCGTTCGGGTAGTCTGATTACTTGTGAACGTGCTATGGAAGAAGGACGC
GATGTTTTTGTTGTACCAGGAAATATTTTAGACGGCCAGTCAGAAGGATGCCATCACCTGATTCAAGAAGGAGCAAAATG
CATTACATCAGGCTTTGATATTTTAAATGAGTTTAACTTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	99.643	100	0.996
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.214	100	0.632
dprA/cilB/dalA	Streptococcus mitis SK321	63.214	100	0.632
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.857	100	0.629
dprA	Lactococcus lactis subsp. cremoris KW2	58.633	99.286	0.582
dprA	Legionella pneumophila strain ERS1305867	44.77	85.357	0.382