Detailed information NTG0478549

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: IAQ69_RS13550
• Genome accession: NZ_CP060811
• Coordinates: 2824286..2825344 (-)
• Length: 352 a.a.
• NCBI ID: WP_180002742.1
• Uniprot ID: -
• Organism: Acinetobacter variabilis strain XM9F202-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2819286..2830344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAQ69_RS13525 (IAQ69_13520)	aroK	2819650..2820186 (-)	537	WP_005233593.1	shikimate kinase AroK	-
IAQ69_RS13530 (IAQ69_13525)	pilQ	2820223..2822346 (-)	2124	WP_413785367.1	type IV pilus secretin PilQ	Machinery gene
IAQ69_RS13535 (IAQ69_13530)	pilP	2822408..2822935 (-)	528	WP_180053721.1	pilus assembly protein PilP	Machinery gene
IAQ69_RS13540 (IAQ69_13535)	pilO	2822935..2823651 (-)	717	WP_034702183.1	type 4a pilus biogenesis protein PilO	Machinery gene
IAQ69_RS13545 (IAQ69_13540)	comN	2823648..2824286 (-)	639	WP_179992180.1	PilN domain-containing protein	Machinery gene
IAQ69_RS13550 (IAQ69_13545)	pilM	2824286..2825344 (-)	1059	WP_180002742.1	pilus assembly protein PilM	Machinery gene
IAQ69_RS13555 (IAQ69_13550)	ponA	2825511..2828039 (+)	2529	WP_180159419.1	penicillin-binding protein PBP1a	-
IAQ69_RS13560 (IAQ69_13555)	-	2828098..2828901 (-)	804	WP_180104160.1	putative RNA methyltransferase	-
IAQ69_RS13565 (IAQ69_13560)	mraY	2828960..2830078 (-)	1119	WP_180016598.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39073.61 Da
• Isoelectric Point: 4.5754

>NTDB_id=478549 IAQ69_RS13550 WP_180002742.1 2824286..2825344(-) (pilM) [Acinetobacter variabilis strain XM9F202-2]
MRRLYRKPNKGLIGVDISSTSVKVLELSVKNGRYWVESYALVPLPESSVVEKNILNPEAVGDALGRAINLANTQSSQSAF
AIPTSMVITKIIEMDADMSDDEREIQIREDAEQYIPFPLDEASLDFEVLPDRLTNPNRVNVLLVATRIENVEARSEVLQI
ANLNPKIADVESFALENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=478549 IAQ69_RS13550 WP_180002742.1 2824286..2825344(-) (pilM) [Acinetobacter variabilis strain XM9F202-2]
GTGCGCAGGTTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTCGATATTAGTTCGACTTCTGTTAAAGTTTTAGAGCT
CTCTGTAAAGAACGGTCGGTACTGGGTAGAAAGTTATGCTTTAGTCCCATTACCAGAAAGTAGTGTCGTTGAAAAAAATA
TTTTAAATCCAGAAGCGGTGGGTGATGCGTTGGGGCGTGCGATTAATTTGGCCAATACCCAGTCCAGTCAGTCAGCCTTT
GCGATTCCAACTTCTATGGTCATCACCAAGATCATCGAAATGGATGCCGATATGTCGGATGATGAACGTGAAATTCAGAT
TCGTGAAGATGCCGAACAATATATTCCTTTCCCACTTGATGAAGCCAGTCTGGACTTTGAAGTTCTGCCAGACCGTTTAA
CCAATCCGAACCGGGTCAATGTCCTGTTGGTAGCGACCCGAATCGAAAATGTTGAAGCGCGTTCTGAAGTACTGCAAATT
GCCAACCTCAATCCAAAAATTGCAGATGTCGAAAGTTTTGCATTAGAAAATGCATTCAAGGTGTTTTCGGATACCTTACC
GATGGGGGTAAATACTGTCGGGATCCTGGATATTGGTCATAGTATGACGACCTTATCCGTCATGCAAAATAACAAGATCA
TTTATACCCGTGAGCAGGTTTTTGGTGGCAAACAGCTGACTCAGGAAATCCAGAACCGTTATGGATTGTCTTTTGAGGAA
GCAGGGCGTGCTAAAAAAACCCGTGCCTTACCGGATGATTATGACATCGAAGTGCTGGAACCTTTCCTGGATGCAGTCGT
GCAGCAGGCAGCGCGTTCATTACAGTTCTTCTTCTCTTCATCTCAGTTTAACGAGATTGACCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCAGGTCTGGCAAAACTATTACAGCAAAAACTCGGCTACCGGGTCACGATTGCCAATCCATTCCTG
CAAATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCCTCACTCATGGTTGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	85.227	100	0.852
comM	Acinetobacter nosocomialis M2	85.227	100	0.852
comM	Acinetobacter baylyi ADP1	78.693	100	0.787
pilM	Legionella pneumophila strain ERS1305867	39.831	100	0.401