Detailed information NTG0476385

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: H4B46_RS07290
• Genome accession: NZ_CP060504
• Coordinates: 1553668..1554726 (+)
• Length: 352 a.a.
• NCBI ID: WP_031950501.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AbCTX9
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1548668..1559726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H4B46_RS07275 (H4B46_07260)	-	1549774..1550106 (+)	333	WP_000169604.1	hypothetical protein	-
H4B46_RS07280 (H4B46_07265)	-	1550109..1550933 (+)	825	WP_086223954.1	putative RNA methyltransferase	-
H4B46_RS07285 (H4B46_07270)	ponA	1550951..1553506 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
H4B46_RS07290 (H4B46_07275)	pilM	1553668..1554726 (+)	1059	WP_031950501.1	pilus assembly protein PilM	Machinery gene
H4B46_RS07295 (H4B46_07280)	pilN	1554726..1555367 (+)	642	WP_000201225.1	PilN domain-containing protein	Machinery gene
H4B46_RS07300 (H4B46_07285)	pilO	1555364..1556104 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
H4B46_RS07305 (H4B46_07290)	pilP	1556115..1556642 (+)	528	WP_000695069.1	pilus assembly protein PilP	Machinery gene
H4B46_RS07310 (H4B46_07295)	pilQ	1556705..1558870 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
H4B46_RS07315 (H4B46_07300)	aroK	1558882..1559451 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39014.55 Da
• Isoelectric Point: 4.4618

>NTDB_id=476385 H4B46_RS07290 WP_031950501.1 1553668..1554726(+) (pilM) [Acinetobacter baumannii strain AbCTX9]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPIGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=476385 H4B46_RS07290 WP_031950501.1 1553668..1554726(+) (pilM) [Acinetobacter baumannii strain AbCTX9]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCGGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATAGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCCTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423