Detailed information NTG0047628

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LCGL_RS15300
• Genome accession: NC_017490
• Coordinates: 1089212..1090081 (+)
• Length: 289 a.a.
• NCBI ID: WP_014024779.1
• Uniprot ID: -
• Organism: Lactococcus garvieae Lg2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1084212..1095081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCGL_RS15280 (LCGL_1065)	-	1084541..1085161 (+)	621	WP_014024781.1	GntR family transcriptional regulator	-
LCGL_RS15285 (LCGL_1066)	-	1085366..1086568 (+)	1203	WP_014024780.1	quaternary amine ABC transporter ATP-binding protein	-
LCGL_RS15290 (LCGL_1067)	-	1086561..1088285 (+)	1725	WP_004257235.1	ABC transporter permease/substrate binding protein	-
LCGL_RS15295 (LCGL_1068)	budA	1088427..1089125 (+)	699	WP_004257238.1	acetolactate decarboxylase	-
LCGL_RS15300 (LCGL_1069)	dprA	1089212..1090081 (+)	870	WP_014024779.1	DNA-processing protein DprA	Machinery gene
LCGL_RS15305 (LCGL_1070)	topA	1090270..1092420 (+)	2151	WP_014024778.1	type I DNA topoisomerase	-
LCGL_RS15310 (LCGL_1071)	trmFO	1092465..1093808 (+)	1344	WP_014024777.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
LCGL_RS15315 (LCGL_1072)	-	1093881..1094102 (-)	222	WP_014024776.1	hypothetical protein	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32873.03 Da
• Isoelectric Point: 9.5626

>NTDB_id=47628 LCGL_RS15300 WP_014024779.1 1089212..1090081(+) (dprA) [Lactococcus garvieae Lg2]
MIRNFEILRLKKAGMSNLGILKLIDYQERHEAKLTLRQLARIAEVKAVPNFIESYKSQDVKRLREQYKTFPSFSILDDIY
PEWLKEMYNPPTLLFYQGNLKLLNFPKLGFVGSREMSKEAPKITYKLIEELKQNFVIVSGLARGVDTSSHVAAIKQQTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLVGEPPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLISSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLITHGQDILDEFYLYEGNFLP

Nucleotide

• Length: 870 bp

>NTDB_id=47628 LCGL_RS15300 WP_014024779.1 1089212..1090081(+) (dprA) [Lactococcus garvieae Lg2]
ATGATTAGAAATTTTGAAATATTGCGTTTGAAAAAAGCAGGAATGTCGAATCTAGGGATTTTGAAACTGATTGACTATCA
AGAGAGGCATGAAGCAAAACTTACTTTACGACAGTTAGCGAGGATCGCAGAAGTCAAAGCTGTCCCTAATTTTATTGAGA
GTTACAAGAGTCAGGATGTGAAACGACTTCGAGAGCAATATAAGACCTTCCCCTCCTTTTCCATCTTAGACGACATTTAT
CCTGAATGGCTGAAAGAAATGTATAATCCCCCGACTCTCCTTTTTTATCAAGGAAATCTTAAGTTGCTTAATTTCCCTAA
ACTCGGATTTGTCGGGAGCCGTGAAATGTCTAAGGAAGCACCTAAAATTACATACAAACTTATTGAGGAATTAAAACAAA
ACTTTGTTATAGTGAGCGGGTTAGCACGCGGTGTTGACACTTCTAGTCATGTAGCTGCTATAAAGCAACAAACACCAACC
ATTGCTGTCATTGGTAACGGTTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAGTATTTAGCCACTCATGA
ATTGGTTTTATCAGAATACCTTGTAGGAGAGCCTCCCCTTAAGTTTCATTTTCCAGAGAGAAATAGAATCATTGCGGGTC
TTTCTCGTGGAATTGTCGTTGTTGAAGCAAAGCAACGTAGCGGTAGCCTCATCTCAAGTCGTTATGCCTTAGAGGGAAAT
AGAGAAGTATTTGCTGTACCTGGAGATATTTTGAACAGAAATGCCTCTGGCTGTAATCAATTAATCCAGCAAGGTGCAGC
CAAGCTTATCACTCATGGTCAAGATATTTTGGATGAATTTTATTTATATGAGGGTAATTTCCTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.251	97.924	0.619
dprA	Streptococcus mutans UA159	55.957	95.848	0.536
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Haemophilus influenzae Rd KW20	36.986	100	0.374