Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   H1R75_RS09725 Genome accession   NZ_CP059471
Coordinates   1934363..1935622 (+) Length   419 a.a.
NCBI ID   WP_182001439.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1929363..1940622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS09700 (H1R75_09700) - 1930250..1932832 (+) 2583 WP_182001438.1 YfhO family protein -
  H1R75_RS09720 (H1R75_09720) rlmH 1933671..1934150 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  H1R75_RS09725 (H1R75_09725) htrA 1934363..1935622 (+) 1260 WP_182001439.1 S1C family serine protease Regulator
  H1R75_RS09730 (H1R75_09730) spo0J 1935683..1936465 (+) 783 WP_182001440.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 43509.36 Da        Isoelectric Point: 4.4136

>NTDB_id=469858 H1R75_RS09725 WP_182001439.1 1934363..1935622(+) (htrA) [Streptococcus equinus strain MDC1]
MKKVNFPKVKSKKILKPLSVILIGFIGGVAGTLLILNMAGISINNVSGSSTKTTTSKVSYSNSNDTTKAVSKVQDAVVSV
INYQSNTSSNDLYAQLFGDNANSNNSTSDDDLNISSEGSGVIYKKDGNSAYVVTNNHVVDGAEQLEIMLSDGTKVVGELV
GADTYSDIAVVKIASDKVSTVAEFADSAKITIGETAIAIGSPLGTDYANSVTQGIVSSLSRTVTMTNDDGETISTNAIQT
DAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVKIINQLEENGKVIRPALGITMANLSDLST
VSISHLNIPTSVTGGVVVASVQSGMPAEGTLERYDVITAIDDEEVNSITDLQSILYGHSTGDSVKVTFYRGTTKKTETVK
LTKTTQDLSSSSDSSNQNQ

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=469858 H1R75_RS09725 WP_182001439.1 1934363..1935622(+) (htrA) [Streptococcus equinus strain MDC1]
ATGAAAAAAGTCAATTTTCCAAAAGTTAAATCAAAAAAAATTCTCAAGCCGCTGTCTGTCATTTTAATCGGATTCATCGG
AGGTGTAGCTGGAACGCTACTGATTTTAAATATGGCTGGCATTTCGATAAATAACGTTAGCGGTTCAAGCACTAAAACTA
CCACAAGTAAAGTAAGTTATTCAAATTCTAATGATACGACAAAAGCCGTTTCAAAAGTTCAAGACGCTGTCGTATCCGTT
ATTAATTATCAATCAAATACTTCATCAAATGATCTGTACGCTCAATTATTTGGTGATAATGCAAATAGCAACAATTCAAC
ATCTGATGACGATTTAAACATCTCTAGCGAAGGTTCTGGTGTTATTTACAAAAAAGATGGAAATTCTGCCTACGTTGTAA
CAAATAACCACGTCGTTGACGGCGCTGAACAGCTCGAAATCATGCTATCTGATGGTACAAAAGTCGTTGGAGAATTAGTC
GGAGCTGATACTTATTCAGATATTGCGGTTGTCAAAATTGCTTCTGATAAAGTTTCTACCGTTGCTGAATTTGCCGACTC
AGCAAAAATTACTATCGGAGAAACAGCTATTGCCATTGGTAGCCCGCTTGGAACTGACTACGCAAACTCTGTAACACAAG
GAATTGTCTCAAGTCTAAGTCGTACAGTAACAATGACTAATGACGATGGTGAAACTATCTCAACAAATGCTATCCAAACC
GATGCTGCTATTAACCCAGGTAACTCTGGAGGTGCTTTGATTAATATTGAAGGACAAGTTATCGGTATCAACTCAAGTAA
AATTTCTTCAACATCTAGTTCAGGTGAGTCTGTAGAAGGTATGGGATTTGCCATTCCATCTAATGATGTCGTTAAAATCA
TCAATCAATTGGAAGAAAACGGAAAAGTTATTCGTCCAGCACTTGGTATCACAATGGCTAACTTAAGCGATCTCTCAACT
GTATCTATTAGCCACCTCAACATTCCAACTAGCGTCACTGGTGGTGTTGTTGTTGCTTCAGTACAATCAGGTATGCCTGC
TGAAGGAACTCTTGAAAGATACGATGTCATCACAGCCATTGATGACGAAGAAGTTAACTCAATCACAGACCTTCAAAGTA
TTCTTTACGGACACTCAACTGGAGACTCTGTCAAAGTTACTTTCTACCGCGGTACAACTAAGAAAACTGAAACAGTTAAA
CTAACTAAAACAACTCAAGACCTCTCTTCTTCATCAGATTCATCAAATCAAAATCAATAA

Domains

Predicted by InterproScan.

Trypsin-like peptidase domain (Trypsin_2)

(118-263)

PDZ domain (PDZ_2)

(306-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.366

96.42

0.611
  htrA Streptococcus gordonii str. Challis substr. CH1

60.599

95.704

0.58
  htrA Streptococcus mitis NCTC 12261

58.765

96.659

0.568
  htrA Streptococcus pneumoniae TIGR4

59.148

95.227

0.563
  htrA Streptococcus pneumoniae D39

59.148

95.227

0.563
  htrA Streptococcus pneumoniae Rx1

59.148

95.227

0.563
  htrA Streptococcus pneumoniae R6

59.148

95.227

0.563