Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   H1R75_RS09730 Genome accession   NZ_CP059471
Coordinates   1935683..1936465 (+) Length   260 a.a.
NCBI ID   WP_182001440.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1930683..1941465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS09720 (H1R75_09720) rlmH 1933671..1934150 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  H1R75_RS09725 (H1R75_09725) htrA 1934363..1935622 (+) 1260 WP_182001439.1 S1C family serine protease Regulator
  H1R75_RS09730 (H1R75_09730) spo0J 1935683..1936465 (+) 783 WP_182001440.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29874.65 Da        Isoelectric Point: 10.1507

>NTDB_id=469859 H1R75_RS09730 WP_182001440.1 1935683..1936465(+) (spo0J) [Streptococcus equinus strain MDC1]
MTETLNLINIDDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGERRLKASKMAGLSEIPAIIK
EISNKKSMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHEELAQFMGKSRPYITNCLRLLNLPSAISKAVERGQLSQG
HARVLLTLKNEKEQEKWYQKVITEEISVRKLEELVKKSKPTKKSSKKNKKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG
DLQLHFQSEEDFNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=469859 H1R75_RS09730 WP_182001440.1 1935683..1936465(+) (spo0J) [Streptococcus equinus strain MDC1]
ATGACTGAGACACTTAACCTAATAAATATTGACGATATTTCTCCAAATCCTTACCAACCACGCTTAGAATTTAAACAAGA
AGAATTAGAAGAGCTATCTCGCTCAATCAAAGCTAATGGCCTTATTCAGCCCATTATCGTTCGAAAATCCGCTATCTTTG
GATATGAGCTTATAGCAGGAGAGAGACGTCTTAAAGCTTCTAAAATGGCTGGTTTGAGCGAAATTCCAGCGATTATCAAA
GAAATTTCTAATAAAAAAAGTATGCAACTGGCTATTGTCGAAAATTTGCAACGTTCAGACCTTAATCCCATCGAGGAAGC
AAAAGCCTATCAGCAATTATTAGACAGAAATCAGATGACACACGAAGAATTGGCTCAATTCATGGGAAAATCTCGTCCTT
ACATCACCAATTGCTTACGATTATTGAATTTACCAAGTGCCATTTCTAAAGCCGTTGAGCGAGGGCAACTATCCCAAGGT
CACGCGCGCGTGCTTCTCACATTAAAAAATGAAAAAGAACAAGAGAAGTGGTACCAAAAAGTCATTACTGAAGAAATCAG
CGTCCGAAAACTGGAAGAACTGGTCAAAAAATCTAAACCCACTAAAAAATCTTCAAAAAAAAATAAAAAAAATATTTTTA
TTCGTCATCAAGAAGAAGAACTATCAAAATTGTTAGGAGTCCCAGTTAGCTTATCCCTTGCCAAATCAGGCTTCAAGGGA
GATTTGCAATTGCATTTTCAGAGCGAAGAAGACTTTAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-197)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.004

99.615

0.608