Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HTZ92_RS00525 | Genome accession | NZ_CP058289 |
| Coordinates | 106053..106481 (+) | Length | 142 a.a. |
| NCBI ID | WP_000993713.1 | Uniprot ID | A0A6F8TC45 |
| Organism | Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 101053..111481
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTZ92_RS00505 (HTZ92_0094) | - | 102441..103328 (+) | 888 | WP_001017317.1 | metal-dependent hydrolase | - |
| HTZ92_RS00510 (HTZ92_0095) | - | 103459..104049 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| HTZ92_RS00515 (HTZ92_0096) | - | 104074..105156 (+) | 1083 | WP_001246543.1 | TPM domain-containing protein | - |
| HTZ92_RS00520 (HTZ92_0097) | - | 105150..105710 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| HTZ92_RS00525 (HTZ92_0098) | pilA | 106053..106481 (+) | 429 | WP_000993713.1 | pilin | Machinery gene |
| HTZ92_RS00530 (HTZ92_0099) | - | 106537..107847 (+) | 1311 | WP_000913740.1 | O-antigen ligase family protein | - |
| HTZ92_RS00535 (HTZ92_0100) | - | 107954..109582 (+) | 1629 | WP_001195770.1 | PglL family O-oligosaccharyltransferase | - |
| HTZ92_RS00540 (HTZ92_0101) | bfr | 109625..110089 (-) | 465 | WP_000678117.1 | bacterioferritin | - |
| HTZ92_RS00545 (HTZ92_0102) | - | 110334..110528 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| HTZ92_RS00550 (HTZ92_0103) | - | 110738..111121 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14515.55 Da Isoelectric Point: 6.1941
>NTDB_id=463486 HTZ92_RS00525 WP_000993713.1 106053..106481(+) (pilA) [Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
Nucleotide
Download Length: 429 bp
>NTDB_id=463486 HTZ92_RS00525 WP_000993713.1 106053..106481(+) (pilA) [Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 strain ATCC 19606]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
92.254 |
100 |
0.923 |
| pilA | Acinetobacter baumannii strain A118 |
44.828 |
100 |
0.458 |
| pilA | Pseudomonas aeruginosa PAK |
41.497 |
100 |
0.43 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae strain A1552 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae C6706 |
40.411 |
100 |
0.415 |