Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC/cflB   Type   Machinery gene
Locus tag   HW271_RS08570 Genome accession   NZ_CP058258
Coordinates   1732745..1733407 (-) Length   220 a.a.
NCBI ID   WP_178895611.1    Uniprot ID   A0A7H8ZAW7
Organism   Streptococcus sp. oral taxon 061 strain F0704     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1727745..1738407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW271_RS08545 (HW271_08545) - 1727878..1728144 (-) 267 WP_006154753.1 Veg family protein -
  HW271_RS08550 (HW271_08550) dnaB 1728141..1729499 (-) 1359 WP_178895607.1 replicative DNA helicase -
  HW271_RS08555 (HW271_08555) rplI 1729542..1729994 (-) 453 WP_178895608.1 50S ribosomal protein L9 -
  HW271_RS08560 (HW271_08560) - 1729991..1731901 (-) 1911 WP_398588224.1 DHH family phosphoesterase -
  HW271_RS08565 (HW271_08565) hpf 1732117..1732665 (-) 549 WP_178895610.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  HW271_RS08570 (HW271_08570) comFC/cflB 1732745..1733407 (-) 663 WP_178895611.1 ComF family protein Machinery gene
  HW271_RS08575 (HW271_08575) comFA/cflA 1733404..1734702 (-) 1299 WP_178895612.1 DEAD/DEAH box helicase Machinery gene
  HW271_RS08580 (HW271_08580) - 1734758..1735393 (+) 636 WP_178895613.1 YigZ family protein -
  HW271_RS08585 (HW271_08585) cysK 1735549..1736475 (+) 927 WP_178895614.1 cysteine synthase A -
  HW271_RS08590 (HW271_08590) - 1736599..1737947 (+) 1349 WP_178894523.1 IS3 family transposase -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 25188.09 Da        Isoelectric Point: 8.2173

>NTDB_id=463260 HW271_RS08570 WP_178895611.1 1732745..1733407(-) (comFC/cflB) [Streptococcus sp. oral taxon 061 strain F0704]
MICLLCGQHLKKNLTFGELLFLKKEESSLCLACYSSFEMIGEEHCPNCYKKGVSTSCQDCQLWCKEGFAVSHEAIFTYNQ
AMKDFFNRYKFDGDYILRKAFAMILNENLKKYKDYHFILIPLSPERYAKRGFNQVAGLIEAAGLSHQDALGKREEKASSS
KNRSERLATELPFFIKEDSRVPKKILLIDDIYTTGATVNRVKSMLENAGAEEVRTFSLVR

Nucleotide


Download         Length: 663 bp        

>NTDB_id=463260 HW271_RS08570 WP_178895611.1 1732745..1733407(-) (comFC/cflB) [Streptococcus sp. oral taxon 061 strain F0704]
ATGATTTGTTTACTTTGTGGACAACATTTGAAGAAAAATCTAACCTTTGGAGAGCTTCTTTTTTTGAAAAAGGAGGAGAG
CTCACTTTGTTTAGCTTGTTACTCAAGTTTTGAAATGATTGGGGAAGAACATTGCCCAAATTGTTATAAAAAAGGGGTGT
CAACATCGTGTCAAGATTGTCAACTTTGGTGTAAAGAAGGGTTTGCAGTAAGTCATGAAGCGATTTTTACTTATAATCAA
GCAATGAAAGACTTTTTTAATCGTTACAAATTTGATGGCGATTATATTCTCCGAAAAGCTTTTGCAATGATTTTAAATGA
GAATTTAAAAAAATACAAGGATTACCATTTTATTTTAATACCGTTAAGCCCTGAGAGGTATGCAAAAAGAGGTTTTAATC
AGGTTGCAGGCCTAATAGAGGCTGCAGGACTTTCCCATCAGGACGCATTAGGGAAAAGAGAAGAAAAAGCAAGTTCTTCT
AAAAATCGTTCAGAGCGTTTGGCCACGGAACTTCCATTTTTTATTAAAGAAGACAGTAGGGTTCCAAAGAAAATTCTATT
GATTGATGATATTTATACGACGGGAGCGACTGTTAACCGTGTCAAGAGTATGCTAGAAAATGCAGGAGCAGAAGAGGTTA
GAACATTTTCCCTCGTAAGATGA

Domains

Predicted by InterproScan.

Phosphoribosyl transferase domain (Pribosyltran)

(182-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8ZAW7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC/cflB Streptococcus pneumoniae Rx1

71.364

100

0.714
  comFC/cflB Streptococcus pneumoniae D39

71.364

100

0.714
  comFC/cflB Streptococcus pneumoniae R6

71.364

100

0.714
  comFC/cflB Streptococcus pneumoniae TIGR4

71.364

100

0.714
  comFC/cflB Streptococcus mitis SK321

70.909

100

0.709
  comFC/cflB Streptococcus mitis NCTC 12261

70

100

0.7
  comFC Bacillus subtilis subsp. subtilis str. 168

35.371

100

0.368