Detailed information NTG0460889

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: JM964_RS04975
• Genome accession: NZ_CP068708
• Coordinates: 1023490..1024332 (-)
• Length: 280 a.a.
• NCBI ID: WP_024395841.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID33329
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1018490..1029332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JM964_RS04960 (JM964_04960)	rplJ	1018691..1019185 (-)	495	WP_002936486.1	50S ribosomal protein L10	-
JM964_RS04965 (JM964_04965)	-	1019519..1020682 (+)	1164	WP_202847450.1	IS30 family transposase	-
JM964_RS04970 (JM964_04970)	topA	1021304..1023397 (-)	2094	WP_024408846.1	type I DNA topoisomerase	-
JM964_RS04975 (JM964_04975)	dprA	1023490..1024332 (-)	843	WP_024395841.1	DNA-processing protein DprA	Machinery gene
JM964_RS04980 (JM964_04980)	-	1024391..1024948 (-)	558	WP_044679452.1	sugar O-acetyltransferase	-
JM964_RS04985 (JM964_04985)	-	1024959..1025219 (-)	261	WP_024401829.1	metal-sensitive transcriptional regulator	-
JM964_RS04990 (JM964_04990)	-	1025326..1025649 (+)	324	WP_024385727.1	rhodanese-like domain-containing protein	-
JM964_RS04995 (JM964_04995)	-	1025646..1027298 (+)	1653	WP_044675002.1	FAD-dependent oxidoreductase	-
JM964_RS05000 (JM964_05000)	-	1027406..1027957 (+)	552	WP_044675003.1	DUF1836 domain-containing protein	-
JM964_RS05005 (JM964_05005)	trhA	1027947..1028597 (+)	651	WP_014735830.1	PAQR family membrane homeostasis protein TrhA	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31234.09 Da
• Isoelectric Point: 8.4451

>NTDB_id=460889 JM964_RS04975 WP_024395841.1 1023490..1024332(-) (dprA) [Streptococcus suis strain ID33329]
MNNFELFKWKKAGLTNLNVNKVLAYQEKHGKKLTLRNVAVVSECKNPVLFMENYKNLDTKACREEFNKYPSFSILDDIYP
LALKQIYNPPVLLFYQGDLELLEKSKLAVVGTRNASKNGIQSVQKIIKELSNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDNIYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSIMDGKSDGCHHLIQEGAKCITSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=460889 JM964_RS04975 WP_024395841.1 1023490..1024332(-) (dprA) [Streptococcus suis strain ID33329]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGTTTGACCAATCTTAATGTGAATAAAGTTTTGGCCTATCAAGA
AAAACACGGAAAAAAATTGACCTTGCGAAATGTCGCTGTAGTGTCTGAATGTAAAAATCCAGTTCTATTTATGGAAAATT
ATAAGAATCTAGATACAAAAGCCTGTCGCGAGGAATTTAATAAGTATCCATCATTTTCAATTTTAGATGACATCTATCCT
TTGGCGCTCAAACAGATTTACAATCCACCTGTACTTTTGTTTTATCAAGGGGATTTAGAATTGCTAGAAAAATCAAAGCT
GGCAGTTGTTGGTACACGAAATGCCAGTAAAAATGGTATCCAATCTGTTCAGAAAATTATTAAAGAATTGAGCAATCGTT
TTGTCATTGTTAGTGGTTTGGCAAGAGGAATTGACACAGCTGCTCATATTGCTAGCCTGAAAAATGGTGGACAAACCATT
GCTGTAATCGGAACAGGTTTAGATAATATTTATCCAAAAGAAAATAAAGATTTGCAGACCTATATTGGAAAACACCATTT
AGTATTAACAGAGTATGAAGCTGGTGCTCAGCCACTCAAATACCATTTCCCAGAACGTAACCGCATTATAGCTGGTTTGG
TGGAAGGATTGGTAGTCTGCGAAGCTAAAATGCGGTCTGGCAGCTTGATTACTTGTGAACGTGCCTTGGAAGAAGGAAGA
GAAGTCTATGCTATTCCAGGTTCCATTATGGACGGAAAATCAGATGGTTGTCATCATCTGATTCAAGAGGGAGCAAAGTG
CATCACATCAGGCTTGGACATCATTTCTGAGTACCAATTTTAA

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	70.357	100	0.704
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.214	100	0.632
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.214	100	0.632
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	63.214	100	0.632
dprA/cilB/dalA	Streptococcus mitis SK321	63.214	100	0.632
dprA	Lactococcus lactis subsp. cremoris KW2	59.643	100	0.596
dprA	Bacillus subtilis subsp. subtilis str. 168	51.244	71.786	0.368
dprA	Legionella pneumophila strain ERS1305867	41.7	88.214	0.368