Detailed information NTG0455591

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: JFL57_RS08325
• Genome accession: NZ_CP066565
• Coordinates: 1838261..1839790 (+)
• Length: 509 a.a.
• NCBI ID: WP_198986896.1
• Uniprot ID: -
• Organism: Histophilus somni strain ASc-MMNZ-VFA-076
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 1833261..1844790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JFL57_RS08305 (JFL57_08305)	murQ	1834044..1834955 (-)	912	WP_012341077.1	N-acetylmuramic acid 6-phosphate etherase	-
JFL57_RS08310 (JFL57_08310)	-	1834958..1836079 (-)	1122	WP_198986895.1	anhydro-N-acetylmuramic acid kinase	-
JFL57_RS08315 (JFL57_08315)	glmU	1836182..1837543 (+)	1362	WP_075293634.1	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	-
JFL57_RS08320 (JFL57_08320)	yihA	1837545..1838159 (+)	615	WP_087437236.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
JFL57_RS08325 (JFL57_08325)	comM	1838261..1839790 (+)	1530	WP_198986896.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
JFL57_RS08335 (JFL57_08335)	-	1840198..1840860 (+)	663	WP_075293637.1	Bax inhibitor-1/YccA family protein	-
JFL57_RS08340 (JFL57_08340)	-	1840938..1841267 (+)	330	WP_075293638.1	TusE/DsrC/DsvC family sulfur relay protein	-
JFL57_RS08345 (JFL57_08345)	-	1841373..1842254 (+)	882	WP_012341045.1	metal ABC transporter substrate-binding protein	-
JFL57_RS08350 (JFL57_08350)	-	1842264..1843022 (+)	759	WP_011608481.1	metal ABC transporter ATP-binding protein	-
JFL57_RS08355 (JFL57_08355)	-	1843027..1843917 (+)	891	WP_198986897.1	metal ABC transporter permease	-
JFL57_RS08360 (JFL57_08360)	-	1843910..1844752 (+)	843	WP_075293640.1	metal ABC transporter permease	-

Sequence

Protein

• Length: 509 a.a.
• Molecular weight: 55816.80 Da
• Isoelectric Point: 9.5752

>NTDB_id=455591 JFL57_RS08325 WP_198986896.1 1838261..1839790(+) (comM) [Histophilus somni strain ASc-MMNZ-VFA-076]
MSLAVVYSRASMGVQAPLVTIEVHLSNGKPAFTLVGLPEKTVTEAQGRVRSALLNAQFKYPAKRITVNLAPADLPKXGGR
YDLPIALGILAASEQINAKKLQQFEFVAELALTGELRGVHGVIPAILAGQKSKRQLIVAQQNANEASLVSQQETFFARNL
LEVVQFLNDDSSLPSSTTLCMQSAVDFSPQSNKDLTDIIGQQHAKRALMIAAAGQHNLLFLGPPGTGKTMLASRLTGLLP
DMTDQEAIETASVTSLVQNELNFQNWKQRPFRAPHHSASSPALVGGGTIPKPGEISLAHNGVLFLDELPEFERRVLDALR
QPLESGEIIISRANAKIQFPARFQLVAAMNPSPTGHYTGIHNRTSPQQVLRYLNRLSGPFLDRFDLSIEVPLLPQGALQN
TEDRGETTAQVKEKVLRVREIQLARAGKVNAYLTGKEIERDCKMPEQDALFLENTLTRLGLSVRAYHRILKVARTIADLN
GDSDIKQNHLAEALSYRAMDRLLRKLSDQ

Nucleotide

• Length: 1530 bp

>NTDB_id=455591 JFL57_RS08325 WP_198986896.1 1838261..1839790(+) (comM) [Histophilus somni strain ASc-MMNZ-VFA-076]
ATGTCATTAGCAGTTGTTTATAGTCGAGCATCAATGGGCGTACAAGCACCTTTGGTGACAATTGAAGTTCACTTGAGTAA
TGGAAAACCTGCTTTTACCCTCGTTGGATTGCCGGAAAAAACAGTAACTGAAGCACAAGGACGAGTACGTAGTGCATTAC
TAAATGCTCAATTCAAATACCCTGCAAAACGCATTACAGTTAATCTTGCACCGGCAGATTTACCAAAAGWAGGCGGGCGT
TACGATCTGCCTATTGCACTCGGTATTTTAGCGGCTTCAGAACAGATTAATGCAAAAAAATTACAGCAATTTGAATTTGT
TGCAGAGTTAGCTCTAACAGGTGAACTAAGAGGCGTACACGGTGTCATTCCTGCTATTTTGGCAGGGCAAAAATCTAAAC
GACAACTTATTGTTGCACAACAAAATGCTAATGAAGCCTCTTTAGTTTCGCAACAGGAAACATTTTTTGCACGGAACTTA
TTGGAGGTCGTACAATTCCTGAATGACGACAGTTCGCTACCTTCATCCACAACGTTATGTATGCAAAGTGCGGTAGATTT
TTCACCTCAATCTAATAAAGATCTGACGGATATTATTGGTCAACAACATGCTAAACGAGCCTTAATGATTGCAGCTGCCG
GACAACATAATTTGTTGTTTCTCGGACCGCCCGGCACAGGTAAAACCATGTTAGCAAGCCGTTTAACTGGCTTGCTACCG
GATATGACAGATCAAGAGGCAATAGAAACCGCCTCTGTAACAAGTTTAGTACAAAACGAATTAAATTTTCAAAATTGGAA
ACAACGTCCTTTTCGTGCACCTCATCATAGTGCCTCATCACCGGCATTGGTCGGAGGAGGAACAATTCCGAAACCGGGAG
AAATTTCTTTGGCTCATAACGGTGTATTATTTTTAGACGAGTTACCCGAATTTGAACGGAGAGTGCTGGATGCTTTACGC
CAGCCTTTAGAAAGCGGAGAAATAATTATTTCACGTGCGAATGCAAAAATTCAGTTTCCGGCACGTTTTCAATTAGTGGC
TGCGATGAATCCAAGTCCAACGGGACATTATACCGGTATACACAACCGCACTTCACCACAACAAGTGTTGCGTTATTTGA
ACAGACTTTCCGGTCCTTTTTTAGATCGCTTTGATCTTTCCATCGAAGTGCCTTTACTTCCACAAGGTGCTTTGCAAAAT
ACCGAAGATCGAGGTGAAACAACAGCACAAGTTAAAGAAAAAGTATTAAGGGTCAGAGAAATTCAGCTAGCTAGAGCCGG
AAAAGTCAATGCTTATTTAACCGGTAAAGAAATTGAGCGAGATTGCAAGATGCCTGAGCAAGATGCACTATTTTTAGAAA
ATACTTTAACCAGACTCGGTTTATCTGTTCGTGCTTATCATCGAATTTTAAAAGTTGCACGCACTATCGCTGATTTAAAC
GGAGATTCTGATATCAAACAAAACCACTTAGCTGAAGCATTAAGCTATCGAGCCATGGATCGTTTGCTACGGAAACTATC
AGACCAATAA

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (194-395)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (405-497)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	83.858	99.804	0.837
comM	Glaesserella parasuis strain SC1401	75.345	99.607	0.75
comM	Vibrio cholerae O1 biovar El Tor strain E7946	64.833	100	0.648
comM	Vibrio cholerae strain A1552	64.833	100	0.648
comM	Vibrio campbellii strain DS40M4	63.636	100	0.646
comM	Legionella pneumophila str. Paris	50.891	99.214	0.505
comM	Legionella pneumophila strain ERS1305867	50.891	99.214	0.505
comM	Acinetobacter baylyi ADP1	48	98.232	0.472
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	45.437	100	0.46