Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   FOC73_RS03155 Genome accession   NZ_CP053998
Coordinates   694617..695312 (-) Length   231 a.a.
NCBI ID   WP_002884269.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 689617..700312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS03140 (FOC73_03140) - 690428..690973 (-) 546 WP_037604688.1 GNAT family N-acetyltransferase -
  FOC73_RS03145 (FOC73_03145) - 691039..692301 (-) 1263 WP_002884638.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  FOC73_RS03150 (FOC73_03150) - 692387..694627 (-) 2241 WP_002884566.1 DNA internalization-related competence protein ComEC/Rec2 -
  FOC73_RS03155 (FOC73_03155) comEA 694617..695312 (-) 696 WP_002884269.1 helix-hairpin-helix domain-containing protein Machinery gene
  FOC73_RS03160 (FOC73_03160) - 695421..696176 (-) 756 WP_002884232.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  FOC73_RS03165 (FOC73_03165) - 696306..697241 (+) 936 WP_002884584.1 polysaccharide deacetylase family protein -
  FOC73_RS03170 (FOC73_03170) - 697291..698055 (+) 765 WP_002884567.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  FOC73_RS03175 (FOC73_03175) - 698059..698328 (+) 270 WP_002884639.1 GIY-YIG nuclease family protein -
  FOC73_RS03180 (FOC73_03180) - 698385..699971 (-) 1587 WP_002884413.1 DEAD/DEAH box helicase -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 24378.26 Da        Isoelectric Point: 4.7321

>NTDB_id=449929 FOC73_RS03155 WP_002884269.1 694617..695312(-) (comEA) [Streptococcus salivarius strain FDAARGOS_771]
MKEKIIAYVKDNRLFVSVIAVLMVIFCFFLWMTCGAGNSMEAETSYTDVTALSTSSSKQSSQSLSEASSQSKTEGSEKDK
SKVTVDVKGAVANPGVYTLKASARVTDAIKAAGGMTEDADAKSVNLAASLSDEEVVYVATKDENLSVLGQSGTGQVSDKG
GQTSAKDGKINLNTATSEELQTISGIGAKRAEDIITYRESHGGFQSVDDLKNVSGIGDKTLEKIRESLYVA

Nucleotide


Download         Length: 696 bp        

>NTDB_id=449929 FOC73_RS03155 WP_002884269.1 694617..695312(-) (comEA) [Streptococcus salivarius strain FDAARGOS_771]
GTGAAGGAAAAGATTATAGCCTATGTCAAAGATAATCGTCTGTTTGTGAGTGTCATCGCTGTACTGATGGTGATTTTTTG
CTTCTTTCTATGGATGACTTGTGGTGCGGGCAACAGTATGGAGGCGGAGACGTCTTATACAGATGTGACAGCTTTGTCAA
CCTCCTCATCCAAACAAAGTTCACAGTCTCTTTCTGAGGCGTCTTCCCAGTCAAAGACTGAAGGAAGTGAAAAGGATAAG
TCAAAAGTAACAGTAGATGTTAAGGGGGCTGTGGCTAATCCGGGTGTTTATACCTTAAAAGCAAGCGCTAGGGTAACTGA
TGCCATCAAAGCCGCTGGGGGAATGACTGAGGATGCGGATGCTAAGAGTGTTAACTTAGCTGCAAGCCTGTCGGACGAAG
AGGTTGTCTATGTGGCAACTAAGGATGAAAACCTTTCTGTTCTTGGTCAATCAGGAACTGGTCAGGTTTCTGACAAAGGA
GGGCAAACTAGTGCTAAGGATGGCAAAATTAACTTAAACACAGCGACTTCAGAGGAGTTGCAAACTATTTCTGGGATTGG
AGCTAAGCGTGCTGAGGATATCATTACCTATCGTGAAAGTCATGGAGGTTTTCAATCCGTAGATGACTTGAAAAATGTCT
CAGGAATTGGTGATAAAACTTTAGAAAAAATCAGAGAGTCCCTCTATGTGGCTTAA

Domains

Predicted by InterproScan.

SLBB domain (SLBB)

(85-138)

Helix-hairpin-helix motif (HHH_3)

(168-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Streptococcus thermophilus LMD-9

91.775

100

0.918
  comEA/celA/cilE Streptococcus mitis SK321

41.921

99.134

0.416
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

40.789

98.701

0.403
  comEA/celA/cilE Streptococcus mitis NCTC 12261

40.351

98.701

0.398
  comEA/celA/cilE Streptococcus pneumoniae Rx1

40.351

98.701

0.398
  comEA/celA/cilE Streptococcus pneumoniae D39

40.351

98.701

0.398
  comEA/celA/cilE Streptococcus pneumoniae R6

40.351

98.701

0.398