Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABK1_RS17355 | Genome accession | NC_017162 |
| Coordinates | 3609504..3609986 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii 1656-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3604504..3614986
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABK1_RS17320 (ABK1_3407) | - | 3604610..3605644 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| ABK1_RS17325 (ABK1_3408) | - | 3605759..3606700 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABK1_RS17330 (ABK1_3409) | rplS | 3606753..3607121 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABK1_RS17335 (ABK1_3410) | trmD | 3607330..3608070 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABK1_RS17340 (ABK1_3411) | rimM | 3608116..3608664 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABK1_RS17345 (ABK1_3412) | rpsP | 3608684..3608935 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABK1_RS17350 (ABK1_3413) | pilE | 3609082..3609507 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ABK1_RS17355 (ABK1_3414) | pilY2 | 3609504..3609986 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ABK1_RS17360 (ABK1_3415) | pilY1 | 3609999..3613853 (-) | 3855 | WP_000768968.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ABK1_RS17365 (ABK1_3416) | pilX | 3613865..3614683 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=44965 ABK1_RS17355 WP_001046420.1 3609504..3609986(-) (pilY2) [Acinetobacter baumannii 1656-2]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=44965 ABK1_RS17355 WP_001046420.1 3609504..3609986(-) (pilY2) [Acinetobacter baumannii 1656-2]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |