Detailed information NTG0448677

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: STCNRZ302_RS08865
• Genome accession: NZ_CP065489
• Coordinates: 1715928..1716356 (-)
• Length: 142 a.a.
• NCBI ID: WP_253269448.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CNRZ302
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1710928..1721356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ302_RS08820 (STCNRZ302_08735)	-	1711065..1711508 (-)	444	WP_084829882.1	CAAX protease	-
STCNRZ302_RS08825	-	1711582..1712007 (-)	426	WP_087010196.1	CPBP family intramembrane glutamic endopeptidase	-
STCNRZ302_RS08830	-	1711964..1712239 (-)	276	WP_232086463.1	CAAX protease	-
STCNRZ302_RS08835 (STCNRZ302_08745)	-	1712251..1712448 (-)	198	WP_014727723.1	helix-turn-helix transcriptional regulator	-
STCNRZ302_RS08840 (STCNRZ302_08750)	-	1712697..1713890 (-)	1194	WP_179970807.1	acetate kinase	-
STCNRZ302_RS08845 (STCNRZ302_08755)	comGH	1713946..1714902 (-)	957	WP_084831205.1	class I SAM-dependent methyltransferase	Machinery gene
STCNRZ302_RS08850 (STCNRZ302_08760)	comGG	1714947..1715264 (-)	318	WP_082309152.1	competence type IV pilus minor pilin ComGG	Machinery gene
STCNRZ302_RS08855 (STCNRZ302_08765)	comGF	1715242..1715679 (-)	438	WP_082309153.1	competence type IV pilus minor pilin ComGF	Machinery gene
STCNRZ302_RS08860 (STCNRZ302_08770)	comGE	1715663..1715956 (-)	294	WP_082309154.1	competence type IV pilus minor pilin ComGE	Machinery gene
STCNRZ302_RS08865 (STCNRZ302_08775)	comGD	1715928..1716356 (-)	429	WP_253269448.1	competence type IV pilus minor pilin ComGD	Machinery gene
STCNRZ302_RS08870 (STCNRZ302_08780)	comGC	1716316..1716642 (-)	327	WP_002946126.1	competence type IV pilus major pilin ComGC	Machinery gene
STCNRZ302_RS08875 (STCNRZ302_08785)	comGB	1716639..1717739 (-)	1101	WP_120764773.1	competence type IV pilus assembly protein ComGB	Machinery gene
STCNRZ302_RS08880 (STCNRZ302_08790)	comGA/cglA/cilD	1717621..1718562 (-)	942	WP_014608745.1	competence type IV pilus ATPase ComGA	Machinery gene
STCNRZ302_RS08885 (STCNRZ302_08795)	-	1718643..1719005 (-)	363	WP_014608746.1	DUF1033 family protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 15829.42 Da
• Isoelectric Point: 10.3330

>NTDB_id=448677 STCNRZ302_RS08865 WP_253269448.1 1715928..1716356(-) (comGD) [Streptococcus thermophilus strain CNRZ302]
MRNMVVKAAQWPIRAFTLLESLMTLAVVVFLTLSLSGSVTGIFQQVEINLFYLRFEYLYRDSQRLASAEGSNVELQLTKD
KVGNGRSSLLIPKSIHLDKGQTLVFDAKGGNSSLTKIRFSSDKEVVTYLLNMGSGKYKKTIS

Nucleotide

• Length: 429 bp

>NTDB_id=448677 STCNRZ302_RS08865 WP_253269448.1 1715928..1716356(-) (comGD) [Streptococcus thermophilus strain CNRZ302]
ATGCGAAACATGGTGGTGAAAGCCGCTCAGTGGCCAATTAGAGCTTTCACCTTGTTGGAGAGCCTGATGACACTAGCAGT
GGTTGTCTTTCTCACTCTGAGTTTGTCAGGCTCAGTCACAGGTATTTTTCAGCAGGTCGAGATTAATCTTTTTTATCTGC
GTTTTGAGTACCTATATCGAGATAGTCAGCGCTTGGCATCAGCGGAAGGATCTAATGTTGAATTGCAGTTAACTAAGGAT
AAGGTTGGTAATGGAAGGTCTAGTCTGCTTATTCCTAAAAGTATTCATCTGGATAAGGGGCAGACGCTAGTGTTTGATGC
TAAAGGGGGCAACTCTAGCCTCACGAAAATTCGTTTTTCAAGTGATAAGGAGGTGGTGACCTATCTGCTTAACATGGGCA
GTGGTAAATATAAAAAGACGATCTCTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	51.908	92.254	0.479
comGD	Streptococcus mutans UA159	51.908	92.254	0.479
comGD	Streptococcus gordonii str. Challis substr. CH1	40.714	98.592	0.401
comGD/cglD	Streptococcus pneumoniae Rx1	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae D39	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae R6	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis NCTC 12261	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae TIGR4	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis SK321	42.52	89.437	0.38
comGD	Lactococcus lactis subsp. cremoris KW2	40.909	92.958	0.38