Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   GE021_RS11055 Genome accession   NZ_CP053792
Coordinates   2258808..2260031 (+) Length   407 a.a.
NCBI ID   WP_093999374.1    Uniprot ID   A0A3P5XRA7
Organism   Streptococcus canis strain HL_77_1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2253808..2265031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS11025 (GE021_011015) - 2253921..2256500 (+) 2580 WP_125074651.1 YfhO family protein -
  GE021_RS11040 (GE021_011030) - 2256973..2257797 (-) 825 Protein_2157 DDE-type integrase/transposase/recombinase -
  GE021_RS11050 (GE021_011040) rlmH 2258117..2258596 (-) 480 WP_125074662.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GE021_RS11055 (GE021_011045) htrA 2258808..2260031 (+) 1224 WP_093999374.1 trypsin-like peptidase domain-containing protein Regulator
  GE021_RS11060 (GE021_011050) spo0J 2260128..2260895 (+) 768 WP_125074652.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42616.03 Da        Isoelectric Point: 5.7603

>NTDB_id=447300 GE021_RS11055 WP_093999374.1 2258808..2260031(+) (htrA) [Streptococcus canis strain HL_77_1]
MPTMKHILKFLGITLIGFLGGILAIVTVNNTSQQSSSTSHSGSATTSKMVFNNTTDTTKAVNVIQNAVVSVINYQDDPSS
SLSNPYIKLFGEDQAKENKDAELTIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTIAEFADSSKLNVGEVAIAIGSPLGTQYANSVTEGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGNNGNSGAVEGIGFAIPSSDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALRQ
INIPTSVTGGIVVASVQAGMPATGKLTQYDVITEIDGKAVNSISDLQSNLYGHNINDTIKVTFYRGTAKKKADIKLTKTT
QDLSKAQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=447300 GE021_RS11055 WP_093999374.1 2258808..2260031(+) (htrA) [Streptococcus canis strain HL_77_1]
ATGCCCACTATGAAACATATCTTAAAATTCTTAGGTATTACACTCATCGGATTTTTAGGAGGAATCTTGGCTATTGTTAC
AGTTAATAATACTAGTCAACAATCTTCTTCTACGTCACACTCAGGTAGTGCAACAACCAGTAAAATGGTTTTCAATAATA
CCACTGATACTACAAAAGCTGTTAACGTTATTCAAAATGCAGTGGTATCCGTTATTAATTATCAAGATGATCCTTCTTCA
TCTTTGTCTAATCCTTACATAAAACTTTTTGGAGAGGATCAGGCAAAAGAAAATAAGGATGCTGAACTAACAATTTTTAG
CGAAGGTTCTGGTGTCATTTATCGAAAAGACGGTAATTCTGCCTATGTTGTTACTAATAATCACGTTATTGATGGTGCTA
AGCGCATTGAAATCCTTATGGCTGATGGATCTAAAGTGGTTGGGGAATTAGTCGGCGCTGATACCTATTCTGACTTAGCA
GTTGTCAAAATTTCTTCTGATAAGATTAAAACAATCGCGGAATTTGCTGATTCAAGCAAACTTAATGTTGGAGAAGTAGC
TATTGCTATAGGTAGTCCTTTAGGAACTCAATATGCCAATTCTGTCACCGAAGGGATTGTTTCAAGTCTCAGTCGTACTG
TTACCTTAAAAAATGAAAATGGTGAAACTGTTTCAACCAATGCTATTCAAACAGACGCTGCCATTAATCCAGGAAACTCT
GGTGGTCCACTCATTAATATCGAAGGACAAGTCATCGGAATTAATTCAAGTAAAATCTCCTCTACACCAACTGGTAATAA
TGGAAATAGCGGAGCTGTCGAAGGAATCGGCTTTGCTATTCCATCTAGTGATGTTATCAAAATTATCAAGCAATTAGAAA
CCAATGGGGAAGTCATCAGACCTGCCCTTGGTATTTCTATGGTTAACTTAAATGATTTATCAACCAATGCCCTTCGTCAA
ATCAATATTCCAACTAGTGTGACAGGTGGGATTGTAGTCGCTTCTGTTCAAGCTGGCATGCCAGCTACAGGTAAACTTAC
TCAATACGATGTGATTACCGAAATCGATGGTAAAGCCGTCAACTCAATTAGTGATCTTCAAAGTAATTTATATGGACACA
ACATTAATGATACTATCAAAGTAACCTTTTACAGAGGAACAGCAAAGAAAAAAGCAGACATCAAATTAACGAAGACTACA
CAAGATTTAAGTAAAGCGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3P5XRA7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.794

99.017

0.602

  htrA Streptococcus mitis NCTC 12261

54.3

100

0.543

  htrA Streptococcus pneumoniae Rx1

54.3

100

0.543

  htrA Streptococcus pneumoniae D39

54.3

100

0.543

  htrA Streptococcus pneumoniae R6

54.3

100

0.543

  htrA Streptococcus pneumoniae TIGR4

54.3

100

0.543

  htrA Streptococcus gordonii str. Challis substr. CH1

54.975

98.771

0.543