Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   GE021_RS11060 Genome accession   NZ_CP053792
Coordinates   2260128..2260895 (+) Length   255 a.a.
NCBI ID   WP_125074652.1    Uniprot ID   A0A3P5Y7U0
Organism   Streptococcus canis strain HL_77_1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2255128..2265895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS11040 (GE021_011030) - 2256973..2257797 (-) 825 Protein_2157 DDE-type integrase/transposase/recombinase -
  GE021_RS11050 (GE021_011040) rlmH 2258117..2258596 (-) 480 WP_125074662.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GE021_RS11055 (GE021_011045) htrA 2258808..2260031 (+) 1224 WP_093999374.1 trypsin-like peptidase domain-containing protein Regulator
  GE021_RS11060 (GE021_011050) spo0J 2260128..2260895 (+) 768 WP_125074652.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28773.51 Da        Isoelectric Point: 10.0680

>NTDB_id=447301 GE021_RS11060 WP_125074652.1 2260128..2260895(+) (spo0J) [Streptococcus canis strain HL_77_1]
MTELLIQIPIEDIVANPYQPRLQFNQKELEDLARSIKANGLIQPIIVRKSEIFGYELVAGERRFKASKIAGLTKVPAIVK
TISALESMQQAIVENLQRADLNAIEEAKAYQLLIDKNKMTHEEVAKYMGKSRPYISNTLRLLQLPDSIQRSVENGDISAG
HARALLAFPDEKEQLLYATKIKNEGISVRRIEQLVTPKPKKSKKDKDIFITSLEKQLAKSLGLKATIKLTSHQTGHLQLP
FANEDELNRIINKLL

Nucleotide


Download         Length: 768 bp        

>NTDB_id=447301 GE021_RS11060 WP_125074652.1 2260128..2260895(+) (spo0J) [Streptococcus canis strain HL_77_1]
ATGACAGAATTATTGATACAAATTCCCATTGAAGATATTGTGGCAAATCCCTATCAACCAAGACTTCAATTTAATCAAAA
AGAGCTTGAAGACTTAGCAAGGTCAATCAAAGCAAATGGACTTATTCAACCTATTATCGTTCGAAAATCTGAAATTTTTG
GTTATGAACTAGTCGCTGGAGAACGACGATTTAAAGCTTCAAAAATAGCAGGACTAACCAAAGTACCAGCTATTGTCAAA
ACAATATCAGCACTTGAAAGCATGCAACAAGCCATTGTTGAAAATTTACAACGAGCTGACCTAAATGCCATCGAAGAAGC
CAAAGCCTACCAGTTACTTATTGACAAAAATAAGATGACTCATGAAGAGGTTGCCAAATATATGGGGAAATCCAGACCCT
ATATTAGCAATACCCTGCGCTTGTTACAACTACCAGATTCTATCCAGAGATCCGTAGAAAATGGGGACATTAGTGCTGGT
CACGCGCGAGCTTTGTTGGCTTTTCCTGATGAAAAAGAACAATTACTATATGCCACTAAAATCAAAAATGAAGGCATAAG
TGTTCGACGAATTGAACAATTGGTTACTCCGAAACCAAAAAAATCAAAAAAAGACAAGGATATTTTTATCACTTCTTTAG
AAAAACAACTCGCCAAATCTCTTGGCTTAAAAGCAACTATTAAGTTGACATCACATCAGACTGGCCACTTGCAGTTACCT
TTTGCTAATGAAGACGAACTGAACAGAATTATCAACAAGTTACTTTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3P5Y7U0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569