Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   GE023_RS10730 Genome accession   NZ_CP053789
Coordinates   2173936..2175159 (+) Length   407 a.a.
NCBI ID   WP_093999374.1    Uniprot ID   A0A3P5XRA7
Organism   Streptococcus canis strain HL_98_2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2168936..2180159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE023_RS10700 (GE023_010695) recF 2169380..2170483 (-) 1104 WP_093999512.1 DNA replication/repair protein RecF -
  GE023_RS10705 (GE023_010700) yaaA 2170485..2170898 (-) 414 WP_093999511.1 S4 domain-containing protein YaaA -
  GE023_RS10710 (GE023_010705) - 2170978..2171877 (-) 900 Protein_2073 IS30 family transposase -
  GE023_RS10715 (GE023_010710) - 2172100..2172924 (-) 825 Protein_2074 DDE-type integrase/transposase/recombinase -
  GE023_RS10725 (GE023_010720) rlmH 2173244..2173723 (-) 480 WP_093999375.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GE023_RS10730 (GE023_010725) htrA 2173936..2175159 (+) 1224 WP_093999374.1 trypsin-like peptidase domain-containing protein Regulator
  GE023_RS10735 (GE023_010730) spo0J 2175256..2176023 (+) 768 WP_093999373.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42616.03 Da        Isoelectric Point: 5.7603

>NTDB_id=447187 GE023_RS10730 WP_093999374.1 2173936..2175159(+) (htrA) [Streptococcus canis strain HL_98_2]
MPTMKHILKFLGITLIGFLGGILAIVTVNNTSQQSSSTSHSGSATTSKMVFNNTTDTTKAVNVIQNAVVSVINYQDDPSS
SLSNPYIKLFGEDQAKENKDAELTIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTIAEFADSSKLNVGEVAIAIGSPLGTQYANSVTEGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGNNGNSGAVEGIGFAIPSSDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALRQ
INIPTSVTGGIVVASVQAGMPATGKLTQYDVITEIDGKAVNSISDLQSNLYGHNINDTIKVTFYRGTAKKKADIKLTKTT
QDLSKAQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=447187 GE023_RS10730 WP_093999374.1 2173936..2175159(+) (htrA) [Streptococcus canis strain HL_98_2]
ATGCCCACTATGAAACATATCTTAAAATTCTTAGGTATTACACTCATCGGATTTTTAGGAGGAATCTTGGCTATTGTTAC
AGTTAATAATACTAGTCAACAATCTTCTTCTACGTCACACTCAGGTAGTGCAACAACCAGTAAAATGGTTTTCAATAATA
CCACTGATACTACAAAAGCTGTTAACGTTATTCAAAATGCAGTGGTATCCGTTATTAATTATCAAGATGATCCTTCTTCA
TCTTTGTCTAATCCTTACATAAAACTTTTTGGAGAGGATCAGGCAAAAGAAAATAAGGATGCTGAACTAACAATTTTTAG
CGAAGGTTCTGGTGTCATTTATCGAAAAGACGGTAATTCTGCCTATGTTGTTACTAATAATCACGTTATTGATGGTGCTA
AGCGCATTGAAATCCTTATGGCTGATGGATCTAAAGTGGTTGGGGAATTAGTCGGCGCTGATACCTATTCTGACTTAGCA
GTTGTCAAAATTTCTTCTGATAAGATTAAAACAATCGCGGAATTTGCTGATTCAAGCAAACTTAATGTTGGAGAAGTAGC
TATTGCTATAGGTAGTCCTTTAGGAACTCAATATGCCAATTCTGTCACCGAAGGGATTGTTTCAAGTCTCAGTCGTACTG
TTACCTTAAAAAATGAAAATGGTGAAACTGTTTCAACCAATGCTATTCAAACAGACGCTGCCATTAATCCAGGAAACTCT
GGTGGTCCACTCATTAATATCGAAGGACAAGTCATCGGAATTAATTCAAGTAAAATTTCCTCTACACCAACTGGTAATAA
TGGTAATAGCGGAGCTGTCGAAGGAATCGGCTTTGCTATTCCATCTAGTGATGTTATCAAAATTATCAAGCAATTAGAAA
CCAATGGAGAAGTCATCAGACCTGCCCTTGGTATCTCTATGGTTAACTTAAATGATTTATCAACCAATGCCCTTCGTCAA
ATCAATATTCCAACTAGTGTGACAGGTGGGATTGTAGTCGCTTCTGTTCAAGCTGGCATGCCAGCTACAGGTAAACTTAC
TCAGTACGATGTGATTACCGAAATCGATGGTAAAGCCGTCAACTCAATTAGTGATCTTCAAAGTAATTTATATGGACATA
ACATTAATGATACTATCAAAGTAACCTTTTACAGAGGGACAGCAAAGAAAAAAGCAGACATCAAATTAACGAAGACTACA
CAAGATTTAAGTAAAGCGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3P5XRA7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.794

99.017

0.602

  htrA Streptococcus mitis NCTC 12261

54.3

100

0.543

  htrA Streptococcus pneumoniae Rx1

54.3

100

0.543

  htrA Streptococcus pneumoniae D39

54.3

100

0.543

  htrA Streptococcus pneumoniae R6

54.3

100

0.543

  htrA Streptococcus pneumoniae TIGR4

54.3

100

0.543

  htrA Streptococcus gordonii str. Challis substr. CH1

54.975

98.771

0.543