Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   GE023_RS10735 Genome accession   NZ_CP053789
Coordinates   2175256..2176023 (+) Length   255 a.a.
NCBI ID   WP_093999373.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_98_2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2170256..2181023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE023_RS10705 (GE023_010700) yaaA 2170485..2170898 (-) 414 WP_093999511.1 S4 domain-containing protein YaaA -
  GE023_RS10710 (GE023_010705) - 2170978..2171877 (-) 900 Protein_2073 IS30 family transposase -
  GE023_RS10715 (GE023_010710) - 2172100..2172924 (-) 825 Protein_2074 DDE-type integrase/transposase/recombinase -
  GE023_RS10725 (GE023_010720) rlmH 2173244..2173723 (-) 480 WP_093999375.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GE023_RS10730 (GE023_010725) htrA 2173936..2175159 (+) 1224 WP_093999374.1 trypsin-like peptidase domain-containing protein Regulator
  GE023_RS10735 (GE023_010730) spo0J 2175256..2176023 (+) 768 WP_093999373.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28708.41 Da        Isoelectric Point: 10.0683

>NTDB_id=447188 GE023_RS10735 WP_093999373.1 2175256..2176023(+) (spo0J) [Streptococcus canis strain HL_98_2]
MTELLIQIPIEDIVANPYQPRLQFNQKELEDLARSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKIAGLTKVPAIVK
TISALESMQQAIVENLQRADLNAIEEAKAYQLLIDKNKMTHEEVAKYMGKSRPYISNTLRLLQLPDSIQRAVENGDISAG
HARALLAFSNEKEQLLYATKIKNEGMSVRQIEQLVTPKPKKSKKDKDIFVTSLEKQLAKSLGLKATIKLTSHQTGHLQLP
FANEDELNRIINKLL

Nucleotide


Download         Length: 768 bp        

>NTDB_id=447188 GE023_RS10735 WP_093999373.1 2175256..2176023(+) (spo0J) [Streptococcus canis strain HL_98_2]
ATGACAGAATTATTGATACAAATTCCCATTGAAGATATTGTGGCAAATCCCTATCAGCCAAGACTTCAATTTAATCAAAA
AGAGCTTGAAGACTTAGCAAGGTCAATCAAAGCAAATGGACTTATTCAACCTATTATCGTTCGAAAATCTGATATTTTTG
GTTATGAACTAGTCGCTGGAGAACGACGATTTAAAGCTTCAAAAATAGCAGGACTAACCAAAGTACCAGCTATTGTCAAA
ACAATATCAGCACTTGAAAGCATGCAACAAGCCATTGTTGAAAATTTACAACGAGCTGACCTAAATGCCATCGAAGAAGC
CAAAGCCTACCAGTTACTTATTGACAAAAATAAGATGACTCATGAAGAGGTTGCCAAATATATGGGGAAATCCAGACCCT
ATATTAGCAATACCTTGCGCTTGTTACAACTACCAGATTCTATCCAGAGAGCCGTAGAAAATGGGGACATTAGTGCTGGT
CACGCGCGAGCCTTATTGGCTTTTTCTAATGAAAAAGAACAATTACTATATGCCACTAAAATCAAAAATGAAGGCATGAG
TGTTCGACAAATTGAACAATTGGTTACTCCGAAACCAAAAAAATCAAAAAAAGACAAGGATATTTTTGTCACTTCTTTAG
AAAAACAACTCGCCAAATCTCTTGGCTTAAAAGCAACTATTAAGTTGACATCACATCAGACTGGCCACTTGCAATTACCT
TTTGCTAATGAAGATGAACTAAACAGAATTATCAACAAGTTACTTTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58