Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HPT10_RS02175 Genome accession   NZ_CP053705
Coordinates   457748..458155 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain PAC6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 452748..463155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HPT10_RS02145 (HPT10_02145) - 452796..453800 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  HPT10_RS02150 (HPT10_02150) pyrR 453824..454336 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HPT10_RS02155 (HPT10_02155) ruvX 454448..454882 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  HPT10_RS02160 (HPT10_02160) - 454882..455451 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  HPT10_RS02165 (HPT10_02165) - 455500..456393 (-) 894 WP_003084580.1 TonB family protein -
  HPT10_RS02170 (HPT10_02170) gshB 456540..457493 (-) 954 WP_171888842.1 glutathione synthase -
  HPT10_RS02175 (HPT10_02175) pilG 457748..458155 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HPT10_RS02180 (HPT10_02180) pilH 458202..458567 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  HPT10_RS02185 (HPT10_02185) - 458618..459154 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  HPT10_RS02190 (HPT10_02190) pilJ 459239..461287 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  HPT10_RS02195 (HPT10_02195) pilK 461348..462223 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=446461 HPT10_RS02175 WP_003084583.1 457748..458155(+) (pilG) [Pseudomonas aeruginosa strain PAC6]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=446461 HPT10_RS02175 WP_003084583.1 457748..458155(+) (pilG) [Pseudomonas aeruginosa strain PAC6]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385