Detailed information NTG0443007

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: HKO16_RS16775
• Genome accession: NZ_CP053098
• Coordinates: 3529505..3530563 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii ATCC 17978
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3524505..3535563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HKO16_RS16750 (HKO16_16775)	aroK	3524775..3525344 (-)	570	WP_000643712.1	shikimate kinase AroK	-
HKO16_RS16755 (HKO16_16780)	pilQ	3525356..3527521 (-)	2166	WP_001017031.1	type IV pilus secretin PilQ	Machinery gene
HKO16_RS16760 (HKO16_16785)	pilP	3527589..3528116 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
HKO16_RS16765 (HKO16_16790)	pilO	3528127..3528867 (-)	741	WP_000076102.1	type 4a pilus biogenesis protein PilO	Machinery gene
HKO16_RS16770 (HKO16_16795)	pilN	3528864..3529505 (-)	642	WP_000201223.1	PilN domain-containing protein	Machinery gene
HKO16_RS16775 (HKO16_16800)	pilM	3529505..3530563 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
HKO16_RS16780 (HKO16_16805)	ponA	3530726..3533281 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
HKO16_RS16785 (HKO16_16810)	-	3533299..3534123 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
HKO16_RS16790 (HKO16_16815)	-	3534126..3534458 (-)	333	WP_000169602.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=443007 HKO16_RS16775 WP_002014066.1 3529505..3530563(-) (pilM) [Acinetobacter baumannii ATCC 17978]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=443007 HKO16_RS16775 WP_002014066.1 3529505..3530563(-) (pilM) [Acinetobacter baumannii ATCC 17978]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGACGCGGTAGT
TCAGCAGGCGGCGCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCATTCTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423