Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   HC659_RS07640 Genome accession   NZ_CP051465
Coordinates   1469988..1470563 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain UCMB5121     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464988..1475563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC659_RS07610 (HC659_15030) dapD 1465174..1465884 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  HC659_RS07615 (HC659_15040) dapI 1465954..1467078 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  HC659_RS07620 (HC659_15050) ykuS 1467140..1467385 (+) 246 WP_003232382.1 YkuS family protein -
  HC659_RS07625 (HC659_15060) mscT 1467422..1468225 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  HC659_RS07630 (HC659_15070) ahpA 1468462..1469004 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  HC659_RS07635 (HC659_15080) ykuV 1469076..1469522 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  HC659_RS07640 (HC659_15090) rok 1469988..1470563 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  HC659_RS07645 (HC659_15100) cse15 1470604..1471569 (-) 966 WP_032721476.1 spore protein Cse15 -
  HC659_RS07650 (HC659_15110) mobA 1471706..1472305 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  HC659_RS07655 (HC659_15120) moeB 1472356..1473375 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  HC659_RS07660 (HC659_15130) glp 1473393..1474685 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  HC659_RS07665 (HC659_15140) mobB 1474646..1475167 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=438561 HC659_RS07640 WP_003232378.1 1469988..1470563(+) (rok) [Bacillus subtilis subsp. subtilis strain UCMB5121]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=438561 HC659_RS07640 WP_003232378.1 1469988..1470563(+) (rok) [Bacillus subtilis subsp. subtilis strain UCMB5121]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1