Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HC659_RS07540 Genome accession   NZ_CP051465
Coordinates   1454108..1454572 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain UCMB5121     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449108..1459572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC659_RS07520 (HC659_14830) kinA 1449575..1451395 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  HC659_RS07525 (HC659_14840) dapX 1451405..1452586 (-) 1182 WP_015252196.1 aminotransferase A -
  HC659_RS07530 (HC659_14850) - 1452788..1452949 (-) 162 WP_003245246.1 hypothetical protein -
  HC659_RS07535 (HC659_14860) cheV 1453153..1454064 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  HC659_RS07540 (HC659_14870) kre 1454108..1454572 (-) 465 WP_003232406.1 YkyB family protein Regulator
  HC659_RS07545 (HC659_14880) ykuC 1454698..1455990 (-) 1293 WP_017697269.1 MFS transporter -
  HC659_RS07550 (HC659_14890) ltdD 1456066..1456560 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  HC659_RS07555 (HC659_14900) ppeE 1456617..1457477 (-) 861 WP_017697271.1 metallophosphoesterase -
  HC659_RS07560 (HC659_14910) fadH 1457620..1458384 (+) 765 WP_113712983.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=438560 HC659_RS07540 WP_003232406.1 1454108..1454572(-) (kre) [Bacillus subtilis subsp. subtilis strain UCMB5121]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=438560 HC659_RS07540 WP_003232406.1 1454108..1454572(-) (kre) [Bacillus subtilis subsp. subtilis strain UCMB5121]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAGCCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1