Detailed information NTG0434840

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: IMQ02_RS22170
• Genome accession: NZ_CP062853
• Coordinates: 4563224..4564744 (+)
• Length: 506 a.a.
• NCBI ID: WP_000058966.1
• Uniprot ID: -
• Organism: Escherichia coli O9:H10 strain Res13-Lact-PEB20-37-A
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4558224..4569744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMQ02_RS22145 (IMQ02_22155)	ilvE	4559778..4560707 (-)	930	WP_000208520.1	branched-chain-amino-acid transaminase	-
IMQ02_RS22150 (IMQ02_22160)	ilvM	4560727..4560990 (-)	264	WP_000983255.1	acetolactate synthase 2 small subunit	-
IMQ02_RS22155 (IMQ02_22165)	ilvG	4560987..4562633 (-)	1647	WP_001012620.1	acetolactate synthase 2 catalytic subunit	-
IMQ02_RS22160 (IMQ02_22170)	ilvX	4562636..4562686 (-)	51	WP_001387183.1	peptide IlvX	-
IMQ02_RS22165 (IMQ02_22175)	ilvL	4562773..4562871 (-)	99	WP_001311244.1	ilv operon leader peptide	-
IMQ02_RS22170 (IMQ02_22180)	comM	4563224..4564744 (+)	1521	WP_000058966.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
IMQ02_RS22175 (IMQ02_22185)	maoP	4564769..4565107 (-)	339	WP_000841001.1	macrodomain Ori organization protein MaoP	-
IMQ02_RS22180 (IMQ02_22190)	hdfR	4565226..4566065 (+)	840	WP_000379245.1	HTH-type transcriptional regulator HdfR	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 55213.40 Da
• Isoelectric Point: 7.4105

>NTDB_id=434840 IMQ02_RS22170 WP_000058966.1 4563224..4564744(+) (comM) [Escherichia coli O9:H10 strain Res13-Lact-PEB20-37-A]
MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHL
QAVCAFLEGKHALERPKPTDAVSRALQHDLSDVVGQEHGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNE
EALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIES
GQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPG
ESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEETLIHLGLSIRAWQRLLKVARTIADIDQSDII
TRQHLQEAVSYRAIDRLLIHLQKLLT

Nucleotide

• Length: 1521 bp

>NTDB_id=434840 IMQ02_RS22170 WP_000058966.1 4563224..4564744(+) (comM) [Escherichia coli O9:H10 strain Res13-Lact-PEB20-37-A]
ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCAATCACTGTTGAGGTACATATCAGTAA
AGGTCTACCCGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTGAAAGAAGCTCGCGATCGCGTGCGCAGCGCCATTA
TCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTTGCTCCAGCCGATCTACCAAAAGAAGGGGGACGA
TATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGT
CGGAGAACTGGCGCTTACAGGCGCTCTGCGTGGCGTTCCCGGCGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCA
GAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTG
CAAGCTGTCTGTGCGTTTCTGGAAGGTAAGCACGCTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACA
ACATGATCTCAGTGATGTTGTCGGTCAGGAACATGGAAAGCGAGGACTGGAAATTACCGCCGCTGGCGGGCACAACCTTT
TACTGATTGGGCCTCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTGTTGCCAGATTTAAGCAATGAA
GAGGCACTGGAGAGTGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCG
CTCACCTCATCACAGTGCATCGTTAACTGCGATGGTAGGCGGTGGCGCAATTCCAGGGCCCGGTGAAATTTCGCTGGCGC
ATAACGGCGTGCTTTTTCTTGATGAGTTACCTGAATTTGAAAGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCC
GGGCAGATCCATCTTTCACGCACGCGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTCGCGGCGATGAATCCCAG
CCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACACCAGAGCAAACGCTGCGTTATCTCAACCGACTCTCTGGTC
CCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCGCCTCCCGGTATTTTGAGTAAAACGGTAGTGCCGGGA
GAAAGCAGCGCCACCGTTAAACAACGCGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAACGCCTG
GCTGGATAGTCCGGAAATACGCCAATTCTGCAAACTTGAGAGCGAAGATGCGATGTGGCTGGAAGAAACGCTGATCCATC
TGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATC
ACACGTCAACATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATA
A

Domains

Predicted by InterProScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (189-386)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (400-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	58.904	100	0.595
comM	Glaesserella parasuis strain SC1401	58.777	100	0.589
comM	Vibrio cholerae O1 biovar El Tor strain E7946	59.163	99.209	0.587
comM	Vibrio cholerae strain A1552	59.163	99.209	0.587
comM	Vibrio campbellii strain DS40M4	57.968	99.209	0.575
comM	Acinetobacter baylyi ADP1	49.4	98.814	0.488
comM	Legionella pneumophila str. Paris	48.394	98.419	0.476
comM	Legionella pneumophila strain ERS1305867	48.394	98.419	0.476
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.269	100	0.443