Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KU884_RS02565 Genome accession   NZ_CP050695
Coordinates   557783..558142 (+) Length   119 a.a.
NCBI ID   WP_167784085.1    Uniprot ID   A0A6H0J0A5
Organism   Aquisalimonas sp. 2447     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 552783..563142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU884_RS02535 (HC341_02515) pyrR 552814..553320 (-) 507 WP_167781147.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KU884_RS02540 (HC341_02520) ruvX 553334..553771 (-) 438 WP_167781148.1 Holliday junction resolvase RuvX -
  KU884_RS02545 (HC341_02525) - 553768..554331 (-) 564 WP_167784084.1 YqgE/AlgH family protein -
  KU884_RS02550 (HC341_02530) - 554387..555244 (-) 858 WP_167781149.1 energy transducer TonB -
  KU884_RS02555 (HC341_02535) - 555409..556479 (-) 1071 WP_167781150.1 FAD:protein FMN transferase -
  KU884_RS02560 (HC341_02540) gshB 556476..557420 (-) 945 WP_167781151.1 glutathione synthase -
  KU884_RS02565 (HC341_02545) pilG 557783..558142 (+) 360 WP_167784085.1 PleD family two-component system response regulator Regulator
  KU884_RS02570 (HC341_02550) - 558245..558610 (+) 366 WP_167781152.1 PleD family two-component system response regulator -
  KU884_RS02575 (HC341_02555) - 558619..559152 (+) 534 WP_167781153.1 chemotaxis protein CheW -
  KU884_RS02580 (HC341_02560) - 559231..561294 (+) 2064 WP_167781154.1 methyl-accepting chemotaxis protein -
  KU884_RS02585 (HC341_02565) - 561307..562197 (+) 891 WP_167781155.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 119 a.a.        Molecular weight: 13390.67 Da        Isoelectric Point: 9.6289

>NTDB_id=434035 KU884_RS02565 WP_167784085.1 557783..558142(+) (pilG) [Aquisalimonas sp. 2447]
MVIDDSKTIRRTAETLLKKEGCEVITANDGFEALAKIADLKPSIIFVDIMMPRLDGYQTCALIKHNQMFKHTPVIMLSSK
DGLFDRARGRIVGSQQYLTKPFTRDELLGAIKRHLNQAA

Nucleotide


Download         Length: 360 bp        

>NTDB_id=434035 KU884_RS02565 WP_167784085.1 557783..558142(+) (pilG) [Aquisalimonas sp. 2447]
ATGGTCATTGACGACAGCAAGACCATTCGCCGCACGGCGGAGACTCTGCTGAAAAAAGAAGGCTGTGAGGTCATCACCGC
CAATGATGGCTTCGAGGCCCTGGCCAAGATTGCCGACCTGAAACCCAGCATCATATTCGTCGACATCATGATGCCGAGGC
TGGACGGTTACCAGACCTGCGCACTGATCAAGCATAACCAGATGTTCAAGCACACGCCCGTGATCATGCTCTCCAGCAAG
GACGGGCTGTTCGATCGTGCGCGCGGACGCATTGTCGGCTCGCAACAGTATCTGACCAAGCCGTTCACGCGTGACGAACT
CCTGGGTGCCATCAAGCGGCACCTCAATCAGGCGGCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0J0A5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.862

97.479

0.739
  vicR Streptococcus mutans UA159

41.88

98.319

0.412
  pilH Synechocystis sp. PCC 6803

41.739

96.639

0.403
  chpA Acinetobacter baumannii strain A118

39.64

93.277

0.37
  chiS Vibrio cholerae strain A1552

38.261

96.639

0.37
  micA Streptococcus pneumoniae Cp1015

36.441

99.16

0.361