Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   HBA50_RS02610 Genome accession   NZ_CP050133
Coordinates   510874..512370 (+) Length   498 a.a.
NCBI ID   WP_045500889.1    Uniprot ID   A0A0F2CHF1
Organism   Streptococcus cristatus ATCC 51100     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 505874..517370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HBA50_RS02595 (HBA50_02595) - 506301..506795 (+) 495 WP_005591876.1 DUF536 domain-containing protein -
  HBA50_RS02600 (HBA50_02600) - 506937..508691 (+) 1755 WP_045500885.1 glycerophosphodiester phosphodiesterase -
  HBA50_RS02605 (HBA50_02605) amiA3 508832..510808 (+) 1977 WP_045500887.1 peptide ABC transporter substrate-binding protein Regulator
  HBA50_RS02610 (HBA50_02610) amiC 510874..512370 (+) 1497 WP_045500889.1 ABC transporter permease Regulator
  HBA50_RS02615 (HBA50_02615) amiD 512370..513296 (+) 927 WP_045500891.1 oligopeptide ABC transporter permease OppC Regulator
  HBA50_RS02620 (HBA50_02620) amiE 513305..514372 (+) 1068 WP_005591881.1 ABC transporter ATP-binding protein Regulator
  HBA50_RS02625 (HBA50_02625) amiF 514383..515309 (+) 927 WP_045500894.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55956.90 Da        Isoelectric Point: 9.7798

>NTDB_id=430200 HBA50_RS02610 WP_045500889.1 510874..512370(+) (amiC) [Streptococcus cristatus ATCC 51100]
MKKYIFMRILRSIVSIFLVTTLTYTIIYTMVPRRLIFKQDPNYNKIATTEDKKTNYENTVYERMGYIDYYDTKELQEKAK
KENKSVTTEATDENKKIYEAYVEKLGKGWKLYQFKESKEFYAVREVPVYERVLEFYANLIQIDHPNVIQDEENPNLKRYI
RIENDPAIGWSVVGSGTRHKYLLYFNGQFPFVHQNFVSLNLGNSYPTYANTPVLQVISQGQGQTKSSEVQFPTGKKTSAV
DIYSRTYKTPSKADSQDIAKYGKGDAYTATKNNYQNPSMIVSSSIIGLIGVALSYLIAVPLGSYMARLKNTWFDSISTGA
LTFMMSLPTIALVYIVRLAGSAIGLPDSFPILGAGDWRSYVLPSLILGLLSAPVTAVWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSSIPASIVGVIAGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCLSIFALLVGD
ILMTMLDPRIKLTSKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=430200 HBA50_RS02610 WP_045500889.1 510874..512370(+) (amiC) [Streptococcus cristatus ATCC 51100]
ATGAAGAAATACATTTTTATGCGTATTTTACGCTCAATTGTGTCGATTTTCTTGGTAACGACCTTGACCTATACCATTAT
TTATACAATGGTTCCGAGAAGATTGATTTTCAAACAAGACCCGAACTATAATAAGATAGCCACAACCGAAGATAAAAAGA
CAAACTATGAAAATACAGTCTATGAACGGATGGGTTATATTGATTATTATGATACAAAAGAGTTGCAGGAAAAAGCCAAG
AAGGAAAATAAATCTGTAACTACTGAGGCAACCGATGAGAATAAAAAAATCTACGAAGCCTACGTTGAAAAACTTGGCAA
AGGTTGGAAATTGTATCAATTCAAAGAAAGCAAAGAATTCTATGCTGTTCGTGAAGTTCCAGTTTACGAGCGCGTACTTG
AGTTCTATGCTAATCTGATTCAGATTGATCATCCAAATGTGATTCAAGATGAGGAAAATCCAAATCTTAAGCGCTATATC
CGTATCGAAAATGACCCGGCCATTGGTTGGTCAGTCGTAGGTTCTGGTACTCGTCATAAATATCTTCTATATTTCAATGG
CCAATTCCCATTTGTTCACCAAAACTTTGTTAGTTTGAACCTAGGAAATTCTTATCCTACTTATGCGAATACGCCTGTAT
TGCAAGTTATTTCCCAAGGACAAGGACAAACAAAATCATCAGAAGTTCAATTCCCAACAGGTAAGAAAACTTCTGCTGTA
GATATTTATTCTCGTACCTACAAGACTCCAAGTAAGGCAGACTCGCAGGATATTGCTAAATATGGCAAGGGAGATGCTTA
CACTGCAACCAAGAATAACTATCAAAACCCATCGATGATTGTAAGCTCATCTATTATTGGTCTGATTGGTGTGGCGCTTT
CTTATTTGATTGCTGTTCCGCTTGGTTCTTATATGGCTCGCTTGAAGAATACTTGGTTTGATAGTATTTCAACAGGTGCC
TTGACCTTCATGATGTCACTGCCAACCATCGCTCTTGTTTATATTGTTCGTTTGGCTGGTTCAGCTATTGGACTTCCAGA
TTCCTTCCCAATTTTGGGAGCGGGCGACTGGCGTTCGTATGTTCTGCCATCCTTGATTCTTGGACTTCTGAGCGCACCTG
TGACAGCGGTCTGGATTCGTCGTTATATGATTGACTTACAATCCCAAGACTTTGTTCGCTTTGCTCGTGCCAAAGGTCTT
TCTGAGAAAGAAATTTCGAACAAGCACATTTTCAAAAATGCTATGGTGCCATTGGTGTCTAGTATTCCAGCTTCTATCGT
TGGTGTTATTGCAGGTGCGACCCTGACAGAAACTGTCTTTGCCTTTCCTGGTATGGGTAAAATGCTGATTGATTCCGTTA
AGGCATCAAATAACTCAATGGTGGTTGGTCTTGTATTCATTTTCACCTGTCTTTCAATTTTTGCCCTCTTAGTTGGTGAT
ATCTTGATGACAATGCTTGACCCACGTATTAAATTAACATCTAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F2CHF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

77.711

100

0.777
  amiC Streptococcus thermophilus LMD-9

77.309

100

0.773
  amiC Streptococcus thermophilus LMG 18311

77.309

100

0.773