Detailed information NTG0042977

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: BDGL_002630
• Genome accession: NC_016603
• Coordinates: 2823227..2823709 (-)
• Length: 160 a.a.
• NCBI ID: YP_004996898.1
• Uniprot ID: F0KFY5
• Organism: Acinetobacter pittii PHEA-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2818227..2828709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BDGL_002623	-	2818312..2819343 (+)	1032	YP_004996891.1	hypothetical protein	-
BDGL_002624	lip	2819459..2820400 (+)	942	YP_004996892.1	lipase	-
BDGL_002625	rplS	2820452..2820820 (-)	369	YP_004996893.1	50S ribosomal protein L19	-
BDGL_002626	trmD	2821040..2821795 (-)	756	YP_004996894.1	tRNA (guanine-1-)-methyltransferase	-
BDGL_002627	rimM	2821838..2822386 (-)	549	YP_004996895.1	16S rRNA processing protein	-
BDGL_002628	rpsP	2822406..2822657 (-)	252	YP_004996896.1	30S ribosomal protein S16	-
BDGL_002629	pilE	2822805..2823230 (-)	426	YP_004996897.1	pilin like competence factor	Machinery gene
BDGL_002630	pilY2	2823227..2823709 (-)	483	YP_004996898.1	pilin like competence factor	Machinery gene
BDGL_002631	pilY1	2823720..2827478 (-)	3759	YP_004996899.1	putative competence factor involved in DNA binding and uptake (ComC)	Machinery gene
BDGL_002632	pilX	2827586..2828338 (-)	753	YP_004996900.1	putative type IV fimbrial biogenesis protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17533.80 Da
• Isoelectric Point: 8.4737

>NTDB_id=42977 BDGL_002630 YP_004996898.1 2823227..2823709(-) (pilY2) [Acinetobacter pittii PHEA-2]
MNKYYILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAQGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGRTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=42977 BDGL_002630 YP_004996898.1 2823227..2823709(-) (pilY2) [Acinetobacter pittii PHEA-2]
ATGAATAAATATTATATTCTGCGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCGACGGCTTCTGCTGCTCAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACCACCACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCGAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGCTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCGGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

3D structure

• AlphaFold DB: F0KFY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	41.279	100	0.444