Detailed information NTG0042976

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: BDGL_002629
• Genome accession: NC_016603
• Coordinates: 2822805..2823230 (-)
• Length: 141 a.a.
• NCBI ID: YP_004996897.1
• Uniprot ID: -
• Organism: Acinetobacter pittii PHEA-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2817805..2828230

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BDGL_002623	-	2818312..2819343 (+)	1032	YP_004996891.1	hypothetical protein	-
BDGL_002624	lip	2819459..2820400 (+)	942	YP_004996892.1	lipase	-
BDGL_002625	rplS	2820452..2820820 (-)	369	YP_004996893.1	50S ribosomal protein L19	-
BDGL_002626	trmD	2821040..2821795 (-)	756	YP_004996894.1	tRNA (guanine-1-)-methyltransferase	-
BDGL_002627	rimM	2821838..2822386 (-)	549	YP_004996895.1	16S rRNA processing protein	-
BDGL_002628	rpsP	2822406..2822657 (-)	252	YP_004996896.1	30S ribosomal protein S16	-
BDGL_002629	pilE	2822805..2823230 (-)	426	YP_004996897.1	pilin like competence factor	Machinery gene
BDGL_002630	pilY2	2823227..2823709 (-)	483	YP_004996898.1	pilin like competence factor	Machinery gene
BDGL_002631	pilY1	2823720..2827478 (-)	3759	YP_004996899.1	putative competence factor involved in DNA binding and uptake (ComC)	Machinery gene

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15188.33 Da
• Isoelectric Point: 7.1292

>NTDB_id=42976 BDGL_002629 YP_004996897.1 2822805..2823230(-) (pilE) [Acinetobacter pittii PHEA-2]
MKNGFTLIELMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATITSIYGSSVSPQQG
QALYNLAFSSITDSSWVLTATPIATSSQAGDGIICLNDQGQKFWAKGATDCALSATSNWLQ

Nucleotide

• Length: 426 bp

>NTDB_id=42976 BDGL_002629 YP_004996897.1 2822805..2823230(-) (pilE) [Acinetobacter pittii PHEA-2]
ATGAAGAATGGTTTTACCTTAATAGAACTCATGATTGTAGTAGCAATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
GTATTTGCAGTATTTACGCAAAGGGCATCGTACAGCTGTTCAATCTGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACGATTACTTCGATTTATGGTTCTAGTGTCAGTCCTCAACAAGGC
CAAGCCTTATATAACTTAGCTTTTTCTAGCATAACTGATTCAAGCTGGGTGTTAACTGCTACACCTATTGCTACTAGTTC
TCAAGCTGGTGATGGGATCATTTGTCTTAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCAACTGATTGTGCGTTAT
CTGCCACATCAAATTGGCTACAGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (26-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Acinetobacter baumannii D1279779	85.816	100	0.858
comF	Acinetobacter baylyi ADP1	51.429	99.291	0.511