Detailed information NTG0423228

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: G4D59_RS16450
• Genome accession: NZ_CP048811
• Coordinates: 3181084..3181770 (-)
• Length: 228 a.a.
• NCBI ID: WP_026050153.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain SCU11
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3176084..3186770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4D59_RS16415 (G4D59_16330)	fliW	3176220..3176654 (-)	435	WP_017368139.1	flagellar assembly protein FliW	-
G4D59_RS16420 (G4D59_16335)	-	3176683..3177261 (-)	579	WP_017368140.1	DUF6470 family protein	-
G4D59_RS16425 (G4D59_16340)	flgL	3177308..3178219 (-)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
G4D59_RS16430 (G4D59_16345)	flgK	3178228..3179748 (-)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
G4D59_RS16435 (G4D59_16350)	-	3179764..3180246 (-)	483	WP_008348261.1	flagellar protein FlgN	-
G4D59_RS16440 (G4D59_16355)	flgM	3180265..3180528 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
G4D59_RS16445 (G4D59_16360)	-	3180608..3181027 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
G4D59_RS16450 (G4D59_16365)	comFC	3181084..3181770 (-)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
G4D59_RS16455 (G4D59_16370)	-	3181767..3182060 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
G4D59_RS16460 (G4D59_16375)	comFA	3182125..3183504 (-)	1380	WP_026050154.1	DEAD/DEAH box helicase	Machinery gene
G4D59_RS16465 (G4D59_16380)	-	3183624..3184466 (-)	843	WP_007499966.1	DegV family protein	-
G4D59_RS16470 (G4D59_16385)	degU	3184678..3185367 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
G4D59_RS16475 (G4D59_16390)	degS	3185432..3186607 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26195.68 Da
• Isoelectric Point: 10.2584

>NTDB_id=423228 G4D59_RS16450 WP_026050153.1 3181084..3181770(-) (comFC) [Bacillus altitudinis strain SCU11]
MICPICESHFVADFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNNFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QRKQSKKRKNERLHQQNLFQLRQANPIVPNDIILIDDIYTTGATVYHAAKILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=423228 G4D59_RS16450 WP_026050153.1 3181084..3181770(-) (comFC) [Bacillus altitudinis strain SCU11]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGATTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAAGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACAACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGGAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGGCAAACCCGAT
CGTTCCAAACGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
AAGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50	100	0.504
comFC/cflB	Streptococcus mitis SK321	39.301	100	0.395
comFC/cflB	Streptococcus mitis NCTC 12261	38.428	100	0.386
comFC/cflB	Streptococcus pneumoniae TIGR4	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae Rx1	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae D39	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae R6	37.555	100	0.377