Detailed information NTG0423231

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: G4D59_RS16475
• Genome accession: NZ_CP048811
• Coordinates: 3185432..3186607 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain SCU11
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3180432..3191607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4D59_RS16445 (G4D59_16360)	-	3180608..3181027 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
G4D59_RS16450 (G4D59_16365)	comFC	3181084..3181770 (-)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
G4D59_RS16455 (G4D59_16370)	-	3181767..3182060 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
G4D59_RS16460 (G4D59_16375)	comFA	3182125..3183504 (-)	1380	WP_026050154.1	DEAD/DEAH box helicase	Machinery gene
G4D59_RS16465 (G4D59_16380)	-	3183624..3184466 (-)	843	WP_007499966.1	DegV family protein	-
G4D59_RS16470 (G4D59_16385)	degU	3184678..3185367 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
G4D59_RS16475 (G4D59_16390)	degS	3185432..3186607 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
G4D59_RS16480 (G4D59_16395)	-	3186829..3187497 (+)	669	WP_008348276.1	YigZ family protein	-
G4D59_RS16485 (G4D59_16400)	-	3187482..3188579 (+)	1098	WP_007499958.1	LCP family protein	-
G4D59_RS16490 (G4D59_16405)	-	3188617..3189684 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
G4D59_RS16495 (G4D59_16410)	tuaH	3189819..3191066 (-)	1248	WP_017368143.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=423231 G4D59_RS16475 WP_003213166.1 3185432..3186607(-) (degS) [Bacillus altitudinis strain SCU11]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=423231 G4D59_RS16475 WP_003213166.1 3185432..3186607(-) (degS) [Bacillus altitudinis strain SCU11]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTCAGGGAAAGAAGAGACGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841