Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   E3S83_RS09860 Genome accession   NZ_CP047843
Coordinates   1987621..1988664 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain UP_620     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1982621..1993664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S83_RS09830 (E3S83_09830) - 1983043..1984299 (-) 1257 WP_072419726.1 aminopeptidase -
  E3S83_RS09835 (E3S83_09835) - 1984302..1984502 (-) 201 WP_000180460.1 DUF1128 family protein -
  E3S83_RS09840 (E3S83_09840) - 1984649..1985113 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  E3S83_RS09845 (E3S83_09845) - 1985120..1985395 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  E3S83_RS09850 (E3S83_09850) - 1985673..1986890 (+) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  E3S83_RS09855 (E3S83_09855) vraR 1987002..1987631 (-) 630 WP_000153536.1 two-component system response regulator VraR Regulator
  E3S83_RS09860 (E3S83_09860) vraS 1987621..1988664 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  E3S83_RS09865 (E3S83_09865) liaF 1988661..1989362 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  E3S83_RS09870 (E3S83_09870) - 1989377..1989763 (-) 387 WP_001110179.1 hypothetical protein -
  E3S83_RS09875 (E3S83_09875) map 1989980..1990738 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  E3S83_RS09880 (E3S83_09880) - 1991269..1992255 (+) 987 WP_000999713.1 FUSC family protein -
  E3S83_RS09885 (E3S83_09885) - 1992745..1993158 (-) 414 WP_001566709.1 hypothetical protein -
  E3S83_RS09890 (E3S83_09890) - 1993187..1993297 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=417655 E3S83_RS09860 WP_001017131.1 1987621..1988664(-) (vraS) [Staphylococcus aureus strain UP_620]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=417655 E3S83_RS09860 WP_001017131.1 1987621..1988664(-) (vraS) [Staphylococcus aureus strain UP_620]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTAATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGCATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGTTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCGATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment