Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | E3T09_RS13460 | Genome accession | NZ_CP047813 |
| Coordinates | 2726429..2726899 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934760.1 | Uniprot ID | A0AAN2D761 |
| Organism | Staphylococcus aureus strain UP_1500 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2721429..2731899
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T09_RS13420 (E3T09_13420) | - | 2721441..2721764 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| E3T09_RS13425 (E3T09_13425) | - | 2721761..2721922 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| E3T09_RS13430 (E3T09_13430) | - | 2722017..2722319 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| E3T09_RS13435 (E3T09_13435) | - | 2722324..2722584 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| E3T09_RS13440 (E3T09_13440) | - | 2722593..2722856 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| E3T09_RS13445 (E3T09_13445) | - | 2722865..2724808 (+) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| E3T09_RS13450 (E3T09_13450) | - | 2724810..2725730 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| E3T09_RS13455 (E3T09_13455) | - | 2725811..2726428 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| E3T09_RS13460 (E3T09_13460) | ssbA | 2726429..2726899 (+) | 471 | WP_000934760.1 | single-stranded DNA-binding protein | Machinery gene |
| E3T09_RS13465 (E3T09_13465) | - | 2726929..2727822 (+) | 894 | WP_043044133.1 | DnaD domain protein | - |
| E3T09_RS13470 (E3T09_13470) | - | 2727829..2728047 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| E3T09_RS13475 (E3T09_13475) | - | 2728056..2728460 (+) | 405 | WP_000401964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E3T09_RS13480 (E3T09_13480) | - | 2728473..2728841 (+) | 369 | WP_000101273.1 | SA1788 family PVL leukocidin-associated protein | - |
| E3T09_RS13485 (E3T09_13485) | - | 2728845..2729087 (+) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| E3T09_RS13490 (E3T09_13490) | - | 2729102..2729356 (+) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| E3T09_RS13600 | - | 2729343..2729513 (+) | 171 | WP_000714403.1 | hypothetical protein | - |
| E3T09_RS13495 (E3T09_13495) | - | 2729506..2730042 (+) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| E3T09_RS13500 (E3T09_13500) | - | 2730079..2730324 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| E3T09_RS13505 (E3T09_13505) | - | 2730321..2730509 (+) | 189 | WP_000195782.1 | DUF1381 domain-containing protein | - |
| E3T09_RS13510 (E3T09_13510) | - | 2730484..2730684 (+) | 201 | WP_001125015.1 | hypothetical protein | - |
| E3T09_RS13515 (E3T09_13515) | rinB | 2730687..2730836 (+) | 150 | WP_001813911.1 | transcriptional activator RinB | - |
| E3T09_RS13520 (E3T09_13520) | - | 2730836..2731036 (+) | 201 | WP_001813913.1 | DUF1514 family protein | - |
| E3T09_RS13525 (E3T09_13525) | - | 2731059..2731520 (+) | 462 | WP_000282752.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=417119 E3T09_RS13460 WP_000934760.1 2726429..2726899(+) (ssbA) [Staphylococcus aureus strain UP_1500]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=417119 E3T09_RS13460 WP_000934760.1 2726429..2726899(+) (ssbA) [Staphylococcus aureus strain UP_1500]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |
| ssb | Neisseria meningitidis MC58 |
32.948 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
32.948 |
100 |
0.365 |