Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/nlmT   Type   Regulator
Locus tag   H7790_RS02430 Genome accession   NZ_CP060645
Coordinates   457552..459705 (-) Length   717 a.a.
NCBI ID   WP_020833322.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1349     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context


Location: 452552..464705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7790_RS02410 (H7790_02435) comE/blpR 453743..454492 (+) 750 WP_136073800.1 response regulator transcription factor Regulator
  H7790_RS02415 (H7790_02440) - 454493..455827 (+) 1335 WP_014635339.1 sensor histidine kinase -
  H7790_RS02420 (H7790_02445) - 455975..456100 (-) 126 WP_011017462.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  H7790_RS02425 (H7790_02450) - 456177..457541 (-) 1365 WP_115230646.1 bacteriocin secretion accessory protein -
  H7790_RS02430 (H7790_02455) comA/nlmT 457552..459705 (-) 2154 WP_020833322.1 peptide cleavage/export ABC transporter Regulator
  H7790_RS02435 (H7790_02460) - 460158..460844 (+) 687 Protein_450 transposase -
  H7790_RS02440 (H7790_02465) - 461032..461277 (+) 246 WP_002994504.1 Blp family class II bacteriocin -
  H7790_RS02445 (H7790_02470) - 461292..461474 (+) 183 WP_002987564.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  H7790_RS02450 (H7790_02475) - 461665..462351 (-) 687 Protein_453 transposase -
  H7790_RS02455 (H7790_02480) - 462670..462897 (+) 228 WP_002992018.1 Blp family class II bacteriocin -
  H7790_RS02460 (H7790_02485) - 462910..463110 (+) 201 WP_115230645.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  H7790_RS09360 - 463471..463599 (+) 129 WP_002985724.1 hypothetical protein -
  H7790_RS02465 (H7790_02490) - 464125..464526 (+) 402 WP_023605036.1 hypothetical protein -

Sequence


Protein


Download         Length: 717 a.a.        Molecular weight: 80543.45 Da        Isoelectric Point: 7.0109

>NTDB_id=416153 H7790_RS02430 WP_020833322.1 457552..459705(-) (comA/nlmT) [Streptococcus pyogenes strain TSPY1349]
MISYRKTFVAQIDARDCGVAALASIAKYYGSDYSLAHLRELAKTNKEGTTALGIVKAAKLMGFETRAIQADMTLFDIEDV
PYPFIVHVNKEGKFQHYYVVYQNKKNYLIIGDPDPTVKVTKMTKERFTSEWTGVAIFLAPEPSYKPHKDKKNGLINFLPL
IFKQRSLIFYIILASLLVTLINIVGSYYLQGILDDYIPNQLKSTLGIISIGLIITYILQQMMSFSRDYLLTVLSQRLSID
VILSYIRHIFELPMSFFATRRTGEIISRFTDANAIIDALASTILSLFLDVSILTIVGTVLLVQNTNLFLLSLVSVPLYIV
IIFIFMHPFEKMNNDVMQSNSMVSSAIIEDINGIETIKSLTSEENRYQKIDSEFVDYLDKSFKLSKYSILQSSLKQGAQL
ILNVIVLWFGAKLVMGGKISVGQLITFNTLLSYFTNPLENIINLQTKLQSAKVANNRLNEVYLVDSEFQEAGTLVNQELL
HGDIQFEELSYKYGFGRDTLSNINLTIKQGDKVSLVGISGSGKTTLAKMIVNFFEPYNGRITINHNDLKMIDKKSLRQHI
NYLPQQAYIFNGSILENLTLGANDCTSHEDILRACEVAEIRQDIEQMPMGYQTELSDGAGLSGGQKQRIALARALLTKAP
VLILDEATSGLDVLTEKRVIDNLLAMTDKTIIFVAHRLSISARTNQVIVLDEGKIIETGSHQELMTKQGFYHHLFSG

Nucleotide


Download         Length: 2154 bp        

>NTDB_id=416153 H7790_RS02430 WP_020833322.1 457552..459705(-) (comA/nlmT) [Streptococcus pyogenes strain TSPY1349]
ATGATATCCTATCGAAAAACATTTGTTGCTCAGATTGATGCTAGAGACTGTGGTGTGGCTGCTCTTGCTTCCATCGCTAA
ATATTACGGTTCAGACTACTCTTTAGCTCATTTAAGAGAGTTAGCTAAAACAAATAAAGAGGGAACAACAGCGCTTGGCA
TCGTCAAAGCTGCCAAATTAATGGGGTTTGAAACAAGAGCTATTCAAGCAGACATGACCCTCTTTGATATAGAAGATGTC
CCTTATCCTTTTATTGTTCATGTTAATAAAGAAGGTAAATTCCAACACTACTATGTCGTCTATCAAAACAAAAAAAATTA
TCTGATAATCGGCGACCCTGACCCGACAGTAAAAGTCACTAAGATGACAAAGGAGCGATTTACTTCTGAATGGACGGGTG
TCGCTATTTTTCTAGCACCCGAGCCCAGCTACAAGCCTCATAAGGACAAAAAGAACGGTCTAATAAACTTTTTACCTCTT
ATTTTTAAACAGCGATCTCTGATTTTCTATATCATATTAGCTAGCCTACTCGTTACTCTGATTAATATTGTAGGTTCTTA
TTACCTACAAGGTATATTAGATGACTATATTCCAAATCAACTGAAATCAACACTCGGCATTATTTCAATTGGTCTTATCA
TTACCTATATCCTCCAACAGATGATGAGTTTTTCGCGAGATTATCTCCTGACTGTACTGAGTCAGCGATTAAGCATTGAC
GTCATTTTATCTTACATTCGCCATATTTTTGAATTACCCATGTCTTTTTTTGCAACTCGCAGAACAGGAGAAATCATTTC
ACGGTTTACAGATGCTAATGCTATTATTGATGCACTCGCTTCTACTATTTTGTCTCTTTTTCTTGATGTCAGTATTTTAA
CTATCGTAGGGACAGTCCTGTTAGTGCAAAATACCAATCTTTTTCTTCTATCTCTGGTTTCAGTCCCTCTATATATTGTT
ATTATCTTTATATTTATGCACCCATTTGAAAAGATGAATAATGATGTCATGCAGAGTAACTCTATGGTTAGCTCAGCCAT
TATCGAAGATATCAATGGCATTGAAACTATTAAATCACTGACCAGTGAAGAAAATCGTTATCAGAAAATTGATAGTGAAT
TTGTGGACTATCTGGATAAATCTTTCAAGTTAAGTAAGTACTCTATTTTACAAAGCAGTCTCAAACAAGGGGCGCAACTA
ATCCTTAACGTGATAGTCTTATGGTTTGGGGCCAAATTAGTTATGGGAGGAAAAATTTCTGTTGGTCAGTTGATTACGTT
TAATACTCTCTTATCTTATTTTACCAATCCTTTAGAAAATATCATTAATCTTCAAACCAAACTTCAATCAGCCAAGGTAG
CTAATAATCGTCTCAATGAAGTTTACCTAGTCGATTCTGAATTTCAAGAGGCTGGGACATTAGTCAATCAAGAATTATTA
CACGGAGACATTCAATTTGAAGAGTTATCCTATAAATATGGCTTTGGACGCGATACTCTATCAAATATTAATCTCACTAT
TAAGCAAGGGGACAAAGTTAGCCTTGTTGGTATTAGTGGATCTGGTAAAACGACTCTAGCTAAAATGATTGTTAATTTTT
TTGAGCCTTATAACGGCCGAATTACCATTAATCATAATGACTTAAAAATGATTGATAAAAAAAGTCTTCGCCAACATATT
AATTATCTCCCCCAACAAGCCTATATTTTTAATGGTTCTATTTTAGAAAATTTAACCTTAGGTGCTAATGACTGTACTAG
TCATGAAGATATTCTAAGAGCTTGTGAGGTTGCAGAAATTCGACAAGATATTGAACAAATGCCTATGGGCTATCAAACAG
AGCTTTCTGATGGTGCCGGACTCTCAGGAGGCCAAAAGCAACGAATTGCGCTTGCCAGAGCTCTCCTAACCAAGGCGCCT
GTGCTTATTCTAGATGAGGCTACAAGCGGTCTTGACGTACTAACTGAAAAGAGGGTTATTGATAATCTTTTGGCTATGAC
GGATAAAACTATTATTTTCGTAGCTCATCGTCTCAGCATTTCAGCGCGGACCAATCAAGTCATTGTGCTTGATGAGGGCA
AAATTATTGAAACAGGATCTCATCAAGAATTAATGACTAAACAAGGTTTCTATCATCATTTATTTAGTGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

73.007

99.721

0.728

  comA Streptococcus mitis NCTC 12261

67.651

99.163

0.671

  comA Streptococcus mitis SK321

67.229

99.163

0.667

  comA Streptococcus pneumoniae Rx1

67.229

99.163

0.667

  comA Streptococcus pneumoniae D39

67.229

99.163

0.667

  comA Streptococcus pneumoniae R6

67.229

99.163

0.667

  comA Streptococcus pneumoniae TIGR4

66.948

99.163

0.664

  comA Streptococcus gordonii str. Challis substr. CH1

66.154

99.721

0.66