Detailed information NTG0041076

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SGPB_RS04985
• Genome accession: NC_015600
• Coordinates: 984969..985811 (-)
• Length: 280 a.a.
• NCBI ID: WP_013851823.1
• Uniprot ID: -
• Organism: Streptococcus pasteurianus ATCC 43144
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 979969..990811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGPB_RS04965 (SGPB_0941)	-	980443..980925 (-)	483	WP_003064748.1	hypothetical protein	-
SGPB_RS04970 (SGPB_0942)	-	980942..981649 (-)	708	Protein_945	DUF3307 domain-containing protein	-
SGPB_RS04975 (SGPB_0943)	-	981649..982314 (-)	666	WP_013851822.1	SatD family protein	-
SGPB_RS04980 (SGPB_0944)	topA	982462..984604 (-)	2143	Protein_947	type I DNA topoisomerase	-
SGPB_RS04985 (SGPB_0946)	dprA	984969..985811 (-)	843	WP_013851823.1	DNA-processing protein DprA	Machinery gene
SGPB_RS04990 (SGPB_0947)	-	985886..986437 (-)	552	WP_013851824.1	sugar O-acetyltransferase	-
SGPB_RS04995 (SGPB_0948)	-	986439..987218 (-)	780	WP_013851825.1	ribonuclease HII	-
SGPB_RS05000 (SGPB_0949)	ylqF	987205..988059 (-)	855	WP_003064765.1	ribosome biogenesis GTPase YlqF	-
SGPB_RS05005 (SGPB_0950)	-	988458..988571 (-)	114	Protein_952	sigma-70 family RNA polymerase sigma factor	-
SGPB_RS05010 (SGPB_0951)	-	988750..990369 (-)	1620	WP_013851826.1	ABC transporter permease	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31025.08 Da
• Isoelectric Point: 8.3551

>NTDB_id=41076 SGPB_RS04985 WP_013851823.1 984969..985811(-) (dprA) [Streptococcus pasteurianus ATCC 43144]
MNNFELFKLKKAGLTNLNILAILDYQEKQEKSLSLRNMAVVSKCKNPILFMEKYKALDIKELRKEFNCFPSVSILDDEYP
LELKYCYNPPVLLFYQGNLELLNRPKMAVVGARTASATGTKSVQKIVKELGNHFVIVSGLARGIDTSAHLSSLKNGGASI
AVIGCGLDVYYPKENKQLQEYMVKNHLVLSEYVAGEAPLKFHFPERNRIIAGLSQGVIVAEAKLRSGSLITCERALEEGR
DVFAIPGNILDGKSDGCHHLIKEGAKCVTSGLDILSEYQI

Nucleotide

• Length: 843 bp

>NTDB_id=41076 SGPB_RS04985 WP_013851823.1 984969..985811(-) (dprA) [Streptococcus pasteurianus ATCC 43144]
ATGAATAATTTTGAATTGTTTAAATTAAAAAAAGCAGGATTAACAAATCTTAATATTTTAGCTATTTTGGATTATCAAGA
AAAGCAAGAGAAATCACTATCTTTGCGTAATATGGCAGTCGTCTCAAAATGTAAAAATCCTATCCTTTTTATGGAAAAAT
ACAAAGCACTGGACATCAAAGAATTGCGCAAAGAATTTAATTGTTTTCCTAGTGTTTCCATACTAGATGACGAATACCCA
TTAGAACTCAAATATTGTTATAATCCACCTGTTTTGCTGTTTTATCAAGGAAATTTAGAATTACTCAATCGCCCAAAAAT
GGCAGTAGTAGGAGCAAGAACAGCATCAGCAACAGGGACAAAATCCGTACAGAAAATTGTCAAAGAACTCGGGAATCATT
TTGTTATCGTTAGTGGGTTGGCGCGTGGCATTGATACCAGTGCGCATTTATCATCTCTAAAAAACGGTGGTGCATCGATT
GCCGTTATCGGTTGTGGACTGGACGTTTATTATCCCAAAGAAAATAAGCAGTTGCAGGAGTACATGGTTAAAAATCACCT
CGTATTAAGTGAGTACGTAGCAGGAGAAGCACCGCTGAAATTCCATTTTCCAGAGCGAAATCGTATTATTGCAGGTTTAT
CACAAGGCGTTATCGTAGCAGAAGCTAAGCTGCGCTCAGGCAGTTTGATTACGTGCGAAAGAGCATTGGAAGAAGGACGA
GACGTTTTTGCTATTCCAGGAAATATTTTAGATGGAAAATCTGATGGCTGTCATCATTTGATAAAAGAGGGCGCAAAATG
CGTCACATCAGGCTTAGATATCCTTTCGGAATATCAAATATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (72-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	74.82	99.286	0.743
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae D39	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae R6	64.286	100	0.643
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	64.286	100	0.643
dprA/cilB/dalA	Streptococcus mitis SK321	64.286	100	0.643
dprA	Lactococcus lactis subsp. cremoris KW2	61.511	99.286	0.611
dprA	Legionella pneumophila strain ERS1305867	42.739	86.071	0.368